Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3974g00045 ATGAAGATTCACTCTCTTGTTATTTGTATGTTTCTTTTCCTTCTAACTCTGAATTTCTTGTTCCCAACAAGAAGATTCAGGAACCTTCCTCCAGGTCCATCATGTCTTCCCATAATCGGCAACCTCCACCAACTTAAACACCCACTCCACCGCACCTTCCAACGCCTATCACAAAAACATGGCCAAGTCTTTTCTCTGTGGTTTGGCTCCCGTTTCGTGGTTGTCGTTTCATCACCTTCCGTAGTCCAAGAATGTTTCACCCAAAACGACACCATCCTAGCAAACCGGCCACCGTTTCTCACCGGCAAGCACATCGGCTACAACTTCACCGCCGTGACGGTGGCCCCTTACGGCGACCACTGGCGCAACCTCCGCCGCATCATCTCCCTCGAGGTCCTCTCGACGCACCGTATCAACTCCTTCTTGGGAATAAGAATGGACGAGATCATGAAGATAGTGCAAAAGCTAGCTCGTGATTCGACCAGGGACTTTGCTAAGGTGGAACTGAAGTCATTGTTTTCAGAGATGACGTTTAACATCATAATGAGAATGATCTCAGGAAAGAGATACTATGGAGAGGATTGTGATGTGACCGATGTTGAAGAAGCGAGGAAATTCAGAGAGCTCATGAAAGAGCTTATATCATTTGGAGGGACAAGCAACCCTGCAGAATTCGTGGGTGTTCTTAGGTTGTTCGATTTTGATAATTTGGAGAAAAGGCTAAAGAGTATTAGTAGTAGAAATGACGCTTTCTTACAAGGACTACTTGATGAGCATCGCAGTGGGAAGCAGAGTGCTAATACTATGATAGATCATCTCTTAAGTCTGCAACAATCACAGCCTGAATATTATACAGATCAAATCATCAAAGGGATTATTCTGGTTATGCTCCTCGGAGGAACAGAGACTTCAGCGACAACTTTAGAATGGGCAATGTCTGCTTTACTAAATCATCCAGAAGTGTTGAAGAAGGCAATGGATGAAATAGATACTCACACAGGACAAGATCGCCTATTAGATGAGTCAGACATTTCGAAAATTCCCTACCTTCAAAATATTATCTATGAGACATTTCGGTTGCATCCTGCATTCCCATTATTGGCACCTCATTTTTCTTCAAAAGATTGCACCATAGGAGGATATAATGTCCCAAAAGGCACTATTTTGTTGGTTAATGCTTGGGCCATTCATAGAGATTCTCAGCTATGGAGTGACCCTATACAATTTAAGCCTGAGAGATTTGAGAAAGAAGGGGAAGCAGATAAGTTAATTCCATTTGGGTTGGGAAGAAGGGCTTGTCCTGGAGCAGGATTGGGGCAGCGTACCGTAGGTTTAACTTTGGGGTTATTGATTCAATGTTTTCAGTGGAAACGAGTAAGTGAGAAAGAAATTGATATGACTGAAGGAAAAGGGGCCACAACGCCGAAACTGATTCCCTTAGAGGCCATGTGTAAAGCACGTCCAACTATCATCAACAAGGTTTTTCAGACAGCCGGTGAAAACATGTAG 1509 0.4367 MKIHSLVICMFLFLLTLNFLFPTRRFRNLPPGPSCLPIIGNLHQLKHPLHRTFQRLSQKHGQVFSLWFGSRFVVVVSSPSVVQECFTQNDTILANRPPFLTGKHIGYNFTAVTVAPYGDHWRNLRRIISLEVLSTHRINSFLGIRMDEIMKIVQKLARDSTRDFAKVELKSLFSEMTFNIIMRMISGKRYYGEDCDVTDVEEARKFRELMKELISFGGTSNPAEFVGVLRLFDFDNLEKRLKSISSRNDAFLQGLLDEHRSGKQSANTMIDHLLSLQQSQPEYYTDQIIKGIILVMLLGGTETSATTLEWAMSALLNHPEVLKKAMDEIDTHTGQDRLLDESDISKIPYLQNIIYETFRLHPAFPLLAPHFSSKDCTIGGYNVPKGTILLVNAWAIHRDSQLWSDPIQFKPERFEKEGEADKLIPFGLGRRACPGAGLGQRTVGLTLGLLIQCFQWKRVSEKEIDMTEGKGATTPKLIPLEAMCKARPTIINKVFQTAGENM 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3974g00045 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
Gabi3974g00045 502 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3974g00045 502 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3974g00045 502 PRINTS E-class P450 group I signature 81 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3974g00045 502 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3974g00045 502 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3974g00045 502 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3974g00045 502 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3974g00045 502 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3974g00045 502 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3974g00045 502 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3974g00045 502 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3974g00045 502 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3974g00045 502 PANTHER CYTOCHROME P450 82C3-RELATED 11 487 - -
Gabi3974g00045 502 FunFam Cytochrome P450 family protein 21 490 - -
Gabi3974g00045 502 SUPERFAMILY Cytochrome P450 30 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3974g00045 502 Gene3D Cytochrome P450 23 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3974g00045 502 CDD CYP81 61 480 - -
Gabi3974g00045 502 Pfam Cytochrome P450 30 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3974g00045 Gabi-Chr3974 617511 629143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3974g00045 1 498 Cytochrome P450 AT4G37370 55.378 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3974g00045 K13260 - gmx:100811727 734.947