Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3974g00044 ATGAGTTCAGTACCGTCACAAACGGCACCTACCTGGCTTAACGTTGGTGGAGAAAATGTCACAAGGAGCAACGATAATTTATTGAGAAACTGGTTTCCAGATGATAGTTATCTCAGTAATCCAGGAAACGCGGAGAATAGTTCATACTCGGGTCAAATTAAGTACCATGTAGATGATAACTATGATGGTCCAAACTCAAATCAATTTACTGCGCCAAGAGAAGTCTACCAAACTGCTAAAGTGATTAATAACAATTCTTCCAGTGCAGGAGGCTCTAACCTTTTAAACATAACTTGGGGTCTTCCTGTGGACAATAATACATATCATCTTGTTCGGCTTCATTTCTGTGACTTATGGAATATACAGCCTGGTCTTACAACCTTCAATCTGTCCATTTATGACAGCCTTGTTACGGTGGTCAATATGAATGACCCAAACGTGTATAACCAGTTGCCTGCACCTTATTATTATGATATTGTGGTTCACTCTGATGATTCTGGGCTCATAAAGATCAGTGTAGAACCTAATTTAGCATCTGCTCATGGACCGGATGCTTTTCTAAACGGGCTTGAAATAATGAAACTGATTGATTCATCAGAAATAATTGTTCCCCTTGACGAATCCAAGCATAATCTTCTTCCAGTGGTGCTGGGTTCAGTTGCTGGAGGTTTAGTCCTGCTTTCTGTCGTGGTAGTTGGGTTTCTTTGGTGTCTTAAATTCAGGAATCAAAGGCCCATCGAAAATTCAGATTGGTTGCCAATTCCAGTCACTGCAGGAGGGAGTTCTCACAGCAGATTGACAGAGGGAACCATCCCATTTCTTGGGCTGAAAATTTCCTTTCTTGATCTTCAATCGGCAACCAATAACTTTGATGCAAAGCAGATAATTGGGAAGGGTGGTTTTGGTAACGTCTATAAAGGAGTTCTCAAGAATGGGATGAGAGTGGCTGTGAAAAGAAGTGAGCCGGGGTCAGGTCAAGGCCTTCCAGAATTTCAGACAGAGATAATGGTTTTGTCCAAGATTCGTCACAGGCACCTTGTTTCCTTAATTGGGTACTGTGACGAAAGGAATGAGATGATACTGGTTTACGAGTACATGGAAAATGGGACACTCAGAGACCATTTGTACAACACGAATTTGCCAAGCTTGTCTTGGAAGCAAAGGCTTGAAATTTGTATTGGAGCTGCCAGGGGTCTTCATTACCTTCACAAAGGAGCTACTGGGGGTGTCATTCACCGTGATGTAAAGTCCACCAACATATTGCTTGATGAGAACCATGTGGCTAAAGTTGCTGACTTTGGCCTTTCAAGGTCAGGTCCTCTTGATCATCAAACATGTGTCAGCACTGGTGTTAAAGGCACTTTTGGGTATCTTGATCCTGAGTATTTCAGGTTGCAACTGCTGACAGAAAAATCTGATGTCTATTCATTTGGGGTAGTTCTTCTGGAAGTGTTATGTGCAAGACCAGCCATTGACCCATCACTTCCAAGGGAGCAGGTGAACTTGGCTGAATTGGGATTGTTTTGCAAAAACAACGGAATGCTGGAAGTGATCATTGATCCTTCCATCAAGGGCCAAATAGATCAAAACTCTCTCAGAAAATTTAGTGAGACAGTAGAAAAATGCATAGAAGACAATGGTTGTGATAGGCCAACCATGGGTGATGTGTTGTGGGACTTGGAGTATGCGCTGCAGCTTCAGCGAGGTGCAATACATAGAGAGCCACATGGGGATAGTTCTAGCAGTGCTTCTGCATCACTTCAATTGCCCAATGTTCGGCGTTTTCCTTCACTCTCCACACGAAGTGAAGTGGATGACTTGTCCTTTGTGAGGGGTAATGAATCCGATAGTGCAGCGGATTCCGTTTTCTCTCGGTTGAAAATTGATGACGCCAGATAG 1899 0.4297 MSSVPSQTAPTWLNVGGENVTRSNDNLLRNWFPDDSYLSNPGNAENSSYSGQIKYHVDDNYDGPNSNQFTAPREVYQTAKVINNNSSSAGGSNLLNITWGLPVDNNTYHLVRLHFCDLWNIQPGLTTFNLSIYDSLVTVVNMNDPNVYNQLPAPYYYDIVVHSDDSGLIKISVEPNLASAHGPDAFLNGLEIMKLIDSSEIIVPLDESKHNLLPVVLGSVAGGLVLLSVVVVGFLWCLKFRNQRPIENSDWLPIPVTAGGSSHSRLTEGTIPFLGLKISFLDLQSATNNFDAKQIIGKGGFGNVYKGVLKNGMRVAVKRSEPGSGQGLPEFQTEIMVLSKIRHRHLVSLIGYCDERNEMILVYEYMENGTLRDHLYNTNLPSLSWKQRLEICIGAARGLHYLHKGATGGVIHRDVKSTNILLDENHVAKVADFGLSRSGPLDHQTCVSTGVKGTFGYLDPEYFRLQLLTEKSDVYSFGVVLLEVLCARPAIDPSLPREQVNLAELGLFCKNNGMLEVIIDPSIKGQIDQNSLRKFSETVEKCIEDNGCDRPTMGDVLWDLEYALQLQRGAIHREPHGDSSSSASASLQLPNVRRFPSLSTRSEVDDLSFVRGNESDSAADSVFSRLKIDDAR 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3974g00044 632 ProSiteProfiles Protein kinase domain profile. 290 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3974g00044 632 Gene3D Phosphorylase Kinase; domain 1 261 365 - -
Gabi3974g00044 632 ProSitePatterns Serine/Threonine protein kinases active-site signature. 410 422 IPR008271 GO:0004672|GO:0006468
Gabi3974g00044 632 FunFam Putative receptor-like protein kinase 9 196 - -
Gabi3974g00044 632 Pfam Malectin-like domain 14 194 IPR024788 -
Gabi3974g00044 632 PANTHER OS07G0166700 PROTEIN 277 567 IPR045272 GO:0004714|GO:0006468
Gabi3974g00044 632 CDD STKc_IRAK 296 561 - -
Gabi3974g00044 632 FunFam Receptor-like protein kinase FERONIA 366 582 - -
Gabi3974g00044 632 Pfam Protein tyrosine and serine/threonine kinase 293 557 IPR001245 GO:0004672|GO:0006468
Gabi3974g00044 632 FunFam receptor-like protein kinase FERONIA 258 365 - -
Gabi3974g00044 632 SUPERFAMILY Protein kinase-like (PK-like) 268 561 IPR011009 -
Gabi3974g00044 632 SMART serkin_6 290 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3974g00044 632 ProSitePatterns Protein kinases ATP-binding region signature. 296 318 IPR017441 GO:0005524
Gabi3974g00044 632 Gene3D Transferase(Phosphotransferase) domain 1 366 578 - -
Gabi3974g00044 632 Gene3D - 10 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3974g00044 Gabi-Chr3974 613384 615770 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3974g00044 13 632 Receptor kinase-like Gene Family AT2G23200 48.433 0.0 532
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gabi3974g00044 PK_Tyr_Ser-Thr 2.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3974g00044 - - gmx:100305412 872.848