Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3974g00042 ATGGCAACTCTTCAGCTCCTCAAAACACAACACTCTCTGTTTGTGCTTGTTTTTCTTCTTCAGTTCTCATCACTGTTGTTCCCCTCACACGGGTACAATCTTCCAGATAAGTACTTCATCAATTGTGGATCAGATGTTGATGTTACTGAAAGTGGTCGCGTTTACGTTGGAGAATCAAACCCAATAGCCAGCTTTAGCAGCAGCAACAAAGAAAGCACACAGTCATCAGTGCCTTCTCCTCTCTACCAAACAGCAAGGATTTTTCGAAAACAATCTTATTATGAGTTCAGTGCCGACACAAATGGGACCTACCTGGTACGCCTTCATTTCTTTGCTTTCACTTCCCAATCTAACCTATCCTCGGCTAGGTTCAATGTTTCGGTTCCTGGGTTTTGGTTGTTGCAAAATTTCAATGCCGGAAATAATAGCAACTCTGCTTTAGTAAAAGAGTTTTTCATGAAAATCACAGACCACAGATTCAAAATCATTTTCACACCACTGGCACAATCATTTGCGTTTGTGAATGCTATAGAACTCTTCGTACTCCCTCTCTATTTGATCTCCGATCTTGTCTCAAGTTTCACTTACGGCACTCAGAGAAACTTAACTAGTTACAATGGCTTGCTCTCGCATGCGTTGGAGACCAAACACAGGCTTAACGTTGGTGGAGAAAATGTCACAAGGAGCAACGATAATTTATTGAGAAACTGGTTTCCAGATGATAGTTATCTCAGTAATCCAGGAAACGCGGAGAATAGTTCATACTCGGGTCAAATTAAGTACCATGTAGATGATAACTCTGATGGTCCAAACTCAAATCAATTTACTGCGCCAAGAGAAGTCTACCAAACTGCTAAAGTGATTAATAACAATTCTTCCAGTGCAGGAGGCTCTAACCTTTTAAACATAACTTGGGGTCTTCCTGTGGACAATAATACATATCATCTTGTTCGGCTTCATTTCTGTGACTTATGGAATATACAGCCTGGTCTTACAACCTTCAATCTGTCCATTTATGACAGCCTTGTTACGGTGGTCAATAGTGACATAAACGTGTATAACCAGTTGCCTGCACCTTATTATTATGATATTGTGGTTCACTCTGATGATTCTGGGCTCATAAAGATCAGTGTAGAACCTAATTTAGCATCTGCTCATGGACCGTATGCTTTTCTAAACGGGCTTGAAATAATGAAACTGATTGATTCATCAGAAATAATTGTTCCCCTTGACGAATCCAAGCATAATCTTCTTCCAGTGGTGCTGGGTTCAGTTGCTGGAGGTTTAGTCCTGCTTTCTGTCGTGGTAGTTGGGTTTCTTTGGTGTCTTAAATTCAGGAATCAAAGGCCTGTTGAGAATTCAGATTGGTTGCCAATTCCAGTTAATGCAGGAGGGAGTTCTCACAGCAGATTGACTGAGGGAACCATCCAAGGCTCCCCTCTCCCAAACATAAATCTTGGGCTGAAAATTTCCTTGCATGATCTTCAATCGGCAACAAAGAACTTCGATGCGAAGCAGATTATTGGGAAGGGTGGTTTTGGCAATGTCTATAAGGGGGTTCTCAAGAATGGGATGAGAGTGGCTGTGAAAAGAAGTGAGCCAGGGTCAGGTCAAGGCCTTCCAGAATTTCAGACAGAGATCATGGTTTTGTCCAAGATTCGTCACAGGCACCTTGTTTCCTTAATTGGGTATTGTGATGAAAGGTATGAGATGATACTGGTTTATGAGTACATGGAAAAAGGGACACTCAGAGACCATTTGTACAATACAAATTTGCCAAGCTTGTCTTGGAAGCAAAGGCTTGAAATTTGTATTGGAGCTGCCAGAGGTCTTCATTACCTTCACAAAGGAGCAGCTGGGGGAATCATTCACCGTGATGTAAAGTCAACCAACATATTGCTTGATGAGAACCATGTGGCTAAAGTTGCTGACTTTGGCCTTTCAAGGTCAGGTCCTCTTGATCATCAACCATATGTCAGCACAGGTGTTAAAGGCACTTTTGGGTATCTTGATCCTGAGTATTTTAGGTCGCAACAGCTGACAGAAAAATCTGATGTTTATTCATTTGGGGTAGTTCTTCTGGAAGTGTTATGTGCAAGACCAGCCATAGACCCGTCTCTTCCAAGGGAGCAGGTGAACTTGGCTGAGTGGGGAATGCTTTGCAAAGACAAGGGGATACTCGATGAGATCATTGATCCTTCCATCAAGGGCCAAATAGATCAAAACTCACTCAGGAAATTTAGTGAGACAGTTGAAAAATGCTTACAAGAAGATGGTTCTGATAGGTCATCCATGGGTGATGTGTTGTGGGACTTGGAGTATGCGTTGCAGCTTCAGCGAGGTGCAATACATAGAGAGCCACATGAGGATAGTTCTAGCAGTGCTTCTGCATCAATTCAATTGCCTAATGTTCGGCGTCTTCCCTCCCTCTCCACACTAAGTGAAATGGATGACTTTTCCATAGTGAGAGGTGATGAATCCGACAGTGCAGTGGATTCAGTTTTCTCGCAGTTGAAAATTGATGACGCCAGATAG 2535 0.4241 MATLQLLKTQHSLFVLVFLLQFSSLLFPSHGYNLPDKYFINCGSDVDVTESGRVYVGESNPIASFSSSNKESTQSSVPSPLYQTARIFRKQSYYEFSADTNGTYLVRLHFFAFTSQSNLSSARFNVSVPGFWLLQNFNAGNNSNSALVKEFFMKITDHRFKIIFTPLAQSFAFVNAIELFVLPLYLISDLVSSFTYGTQRNLTSYNGLLSHALETKHRLNVGGENVTRSNDNLLRNWFPDDSYLSNPGNAENSSYSGQIKYHVDDNSDGPNSNQFTAPREVYQTAKVINNNSSSAGGSNLLNITWGLPVDNNTYHLVRLHFCDLWNIQPGLTTFNLSIYDSLVTVVNSDINVYNQLPAPYYYDIVVHSDDSGLIKISVEPNLASAHGPYAFLNGLEIMKLIDSSEIIVPLDESKHNLLPVVLGSVAGGLVLLSVVVVGFLWCLKFRNQRPVENSDWLPIPVNAGGSSHSRLTEGTIQGSPLPNINLGLKISLHDLQSATKNFDAKQIIGKGGFGNVYKGVLKNGMRVAVKRSEPGSGQGLPEFQTEIMVLSKIRHRHLVSLIGYCDERYEMILVYEYMEKGTLRDHLYNTNLPSLSWKQRLEICIGAARGLHYLHKGAAGGIIHRDVKSTNILLDENHVAKVADFGLSRSGPLDHQPYVSTGVKGTFGYLDPEYFRSQQLTEKSDVYSFGVVLLEVLCARPAIDPSLPREQVNLAEWGMLCKDKGILDEIIDPSIKGQIDQNSLRKFSETVEKCLQEDGSDRSSMGDVLWDLEYALQLQRGAIHREPHEDSSSSASASIQLPNVRRLPSLSTLSEMDDFSIVRGDESDSAVDSVFSQLKIDDAR 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3974g00042 844 ProSiteProfiles Protein kinase domain profile. 502 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3974g00042 844 FunFam Receptor-like protein kinase FERONIA 578 794 - -
Gabi3974g00042 844 Gene3D - 37 181 - -
Gabi3974g00042 844 Gene3D - 212 401 - -
Gabi3974g00042 844 FunFam Putative receptor-like protein kinase 211 401 - -
Gabi3974g00042 844 Gene3D Phosphorylase Kinase; domain 1 470 577 - -
Gabi3974g00042 844 PANTHER OS07G0166700 PROTEIN 489 779 IPR045272 GO:0004714|GO:0006468
Gabi3974g00042 844 FunFam Putative receptor-like protein kinase 37 183 - -
Gabi3974g00042 844 FunFam receptor-like protein kinase FERONIA 468 577 - -
Gabi3974g00042 844 Pfam Protein tyrosine and serine/threonine kinase 505 769 IPR001245 GO:0004672|GO:0006468
Gabi3974g00042 844 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Gabi3974g00042 844 Gene3D Transferase(Phosphotransferase) domain 1 578 796 - -
Gabi3974g00042 844 CDD STKc_IRAK 508 773 - -
Gabi3974g00042 844 ProSitePatterns Protein kinases ATP-binding region signature. 508 530 IPR017441 GO:0005524
Gabi3974g00042 844 SUPERFAMILY Protein kinase-like (PK-like) 491 800 IPR011009 -
Gabi3974g00042 844 Pfam Malectin-like domain 40 399 IPR024788 -
Gabi3974g00042 844 SMART serkin_6 502 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3974g00042 Gabi-Chr3974 597191 600076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3974g00042 12 844 Receptor kinase-like Gene Family AT2G23200 46.379 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gabi3974g00042 Malectin_like 9.1e-31 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3974g00042 - - gmx:100789555 1115.14