Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3974g00026 ATGAGCTACACGAGTGTCAGTCTCCCTTCATGGTGGAGAATTCTTGAACTTGTTCTTCTCCTTCTTCTCGTTACTAATTTTAACCAATGTTGTGGCCTAAGTAGAGATGGTGTTTTGTTGCTTTCGTTCAAGTACGCTGTGCTGAGTGATCCACTCTTAGCTCTTGGAACCTGGAACTACAGCGATGAGACACCGTGTTCGTGGAATGGAGTTGATTGTTCGATTGTACCAGGTGCAGCAACAACAACAACAAACGCTACACAATATCGCGTTACTGGGTTGTCTCTACCACATTCTAGGCTTGTGGGTTCTATTCCTTCCGATCTGGGTTCCATTGAGCACCTCCAAATTCTTGATCTTTCCAACAATTCACTCAACGGGTCTCTTCCTTCTCCACTTTTCCAAGCTTCCGAGCTTCGGTTTCTTAACTTGTCTAATAACTTCATAACAGGGGAGGTTCCAGAATCCATAGTACAGCTCAGGAATCTTCAGTTTCTTAATCTTTCTGATAATGCCTTGGTGGGGAAAGTACCCAACAATCTTTCAAACATGCAAAATCTAACTGTTGCTGCATTGAAGAACAATTACTTGTCTGGCTTTCTTCCTAGCGGATTGAGAACACTGCAAGTTTTGGATCTGTCCTTTAACTTGTTGAATGGAACTCTGCCCCAAGACTTCGGTGGTGACGCCATGCGTTACTTGAACATATCCTATAACCGATTTTCTGGGAAAATCCCACAAGAGTTTGCGGGAAAAATTCCAAGTAACGCCACCGTTGACCTCTCATTCAACAATCTAACAGGCCAGATTCCAGATTCGACCGTTTTGTTTAATCAGAAGCCAAGTTCTTTCTTTGGGAATGTTGATCTATGCGGTGAACCAACAAAAAAATCATGTCCTATTCCTTCTTCACCATCCTCTGAACCAAAAGTTTCTGATCCTACATCACCTCCTGCAATAGCTGCGATTCCAAAGACATTTGATTCTCCCATGGCACCAACCGGATCATCTTCTCAGAAAAAACAGAGTGGCCTCAGACGAGGAACGATTATAGAAATCGTGGTGGGAGATATAGTAGGCATTGGAATCTTAGCCACGATTTTCGTGTACGTGTATCGATTGAAGAGAAAGAAGGAGGCTGAGAGTGTAATAAAGAACGAAGCAGCTGCAGCAAGGAGTGACAGTTCCTCATCAACCTCGGAGTCAAGAGGGTTCACGAGGTGGTCGTGCTTGCGCAAAAGAGCAGAGGAAGAAGAATCCTCGGAGTCCACGAGCTCTTCTGATAGTGACGTGGAAGCACAGGAGGGGCAGAACCAGAAGAAGGGTCATGAAAATCAGAATCAACAAGGGAACAAAACGGGTACTCTCGTGACCGTTGATGGTGAAAGAGAACTCGAATTGGAAACACTACTGAAAGCCTCAGCGTACATATTGGGTGCAACCGGTTCAAGCATAATGTACAAGGCTGTGCTTGAAGATGGAACGTCCTTAGCGGTTCGCAGAATCGGTGAGAGTGGCGTGGAGCGGTTCAAGGACTTCGAGAATCAGGTTCGGGTCATAGCTAAACTGGTTCACCCAAATCTTGTTCGGGTTCGTGGCTTCTACTGGGGACACGATGAGAAGCTCATCGTCTATGACTTCGTTCCTAATGGCAGCCTTGCCAGTGTTCGTTACAGGAAGGTGGGCTCCTCGCCTAGTCATTTACCGTGGGAAGTCCGACTCAAGATAGCGAAAGGGGTGGCACGTGGGCTAGCTTACCTCCACGAGAAAAAGCACGTGCATGGAAATTTGAAGCCTAACAATATTCTATTGGGCAATGACATGGAACCCAAGATTGGAGACTTTGGGCTTGAGAGAATAGTGACGGGTGACACCAGCTATAAAGCCGGAGGGTCTTCACGTATTTTTGGGAGCAAGAGATCCACGGCCTCGCGTGAAAGCTTCCAAGACATCACGTTTGGGCCTAGCCCGAGCCCGAGCCCGAGCTCAATAAGCGGTGTATCTCCTTACCATGCTCCTGAGTCACTCAGGAACTTGAAGCCTCACCCGAAGTGGGATGTGTACTCTTTTGGGGTCTTGTTTCTTGAGTTGCTAACGGGGAAGGTTGTGGTTTTGGATGACATGGGCCAAGGGCCTGGGCTTTTGGTTGAGGATAAGAACCGGGCCTTGCGGATGGCTGATGTCGCTATTCGTGTTGAGATGGAGGGTAAGGAGGAGGCCTTGTTGGCCTATTTCAAGTTAGGGTACAGTTGTGTATCTAGTGTTCCACAGAAAAGGCCACCAATGAAAGAGGTGCTACAAGTTCTTGATAAGATCCCGTCCTCGTCTTCTTGCTCCTCATATTATTATAGCCAATAA 2358 0.4678 MSYTSVSLPSWWRILELVLLLLLVTNFNQCCGLSRDGVLLLSFKYAVLSDPLLALGTWNYSDETPCSWNGVDCSIVPGAATTTTNATQYRVTGLSLPHSRLVGSIPSDLGSIEHLQILDLSNNSLNGSLPSPLFQASELRFLNLSNNFITGEVPESIVQLRNLQFLNLSDNALVGKVPNNLSNMQNLTVAALKNNYLSGFLPSGLRTLQVLDLSFNLLNGTLPQDFGGDAMRYLNISYNRFSGKIPQEFAGKIPSNATVDLSFNNLTGQIPDSTVLFNQKPSSFFGNVDLCGEPTKKSCPIPSSPSSEPKVSDPTSPPAIAAIPKTFDSPMAPTGSSSQKKQSGLRRGTIIEIVVGDIVGIGILATIFVYVYRLKRKKEAESVIKNEAAAARSDSSSSTSESRGFTRWSCLRKRAEEEESSESTSSSDSDVEAQEGQNQKKGHENQNQQGNKTGTLVTVDGERELELETLLKASAYILGATGSSIMYKAVLEDGTSLAVRRIGESGVERFKDFENQVRVIAKLVHPNLVRVRGFYWGHDEKLIVYDFVPNGSLASVRYRKVGSSPSHLPWEVRLKIAKGVARGLAYLHEKKHVHGNLKPNNILLGNDMEPKIGDFGLERIVTGDTSYKAGGSSRIFGSKRSTASRESFQDITFGPSPSPSPSSISGVSPYHAPESLRNLKPHPKWDVYSFGVLFLELLTGKVVVLDDMGQGPGLLVEDKNRALRMADVAIRVEMEGKEEALLAYFKLGYSCVSSVPQKRPPMKEVLQVLDKIPSSSSCSSYYYSQ 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3974g00026 785 MobiDBLite consensus disorder prediction 296 345 - -
Gabi3974g00026 785 Pfam Leucine rich repeat N-terminal domain 35 74 IPR013210 -
Gabi3974g00026 785 ProSiteProfiles Protein kinase domain profile. 472 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3974g00026 785 MobiDBLite consensus disorder prediction 330 345 - -
Gabi3974g00026 785 SUPERFAMILY Protein kinase-like (PK-like) 477 772 IPR011009 -
Gabi3974g00026 785 CDD STKc_IRAK 478 772 - -
Gabi3974g00026 785 Pfam Leucine rich repeat 114 173 IPR001611 GO:0005515
Gabi3974g00026 785 SMART LRR_typ_2 112 136 IPR003591 -
Gabi3974g00026 785 SMART LRR_typ_2 160 184 IPR003591 -
Gabi3974g00026 785 SMART LRR_typ_2 205 228 IPR003591 -
Gabi3974g00026 785 MobiDBLite consensus disorder prediction 386 457 - -
Gabi3974g00026 785 Gene3D Ribonuclease Inhibitor 205 301 IPR032675 -
Gabi3974g00026 785 SUPERFAMILY L domain-like 36 294 - -
Gabi3974g00026 785 MobiDBLite consensus disorder prediction 636 669 - -
Gabi3974g00026 785 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 204 776 IPR046959 -
Gabi3974g00026 785 MobiDBLite consensus disorder prediction 407 421 - -
Gabi3974g00026 785 Gene3D Ribonuclease Inhibitor 34 204 IPR032675 -
Gabi3974g00026 785 MobiDBLite consensus disorder prediction 440 456 - -
Gabi3974g00026 785 MobiDBLite consensus disorder prediction 636 670 - -
Gabi3974g00026 785 MobiDBLite consensus disorder prediction 389 406 - -
Gabi3974g00026 785 FunFam Leucine-rich repeat receptor-like protein kinase 207 301 - -
Gabi3974g00026 785 Gene3D Phosphorylase Kinase; domain 1 433 547 - -
Gabi3974g00026 785 PRINTS Leucine-rich repeat signature 160 173 - -
Gabi3974g00026 785 PRINTS Leucine-rich repeat signature 115 128 - -
Gabi3974g00026 785 Gene3D Transferase(Phosphotransferase) domain 1 548 781 - -
Gabi3974g00026 785 Pfam Protein kinase domain 478 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3974g00026 785 FunFam Os07g0541700 protein 548 638 - -
Gabi3974g00026 785 FunFam Leucine-rich repeat receptor-like protein kinase 34 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3974g00026 Gabi-Chr3974 328720 331910 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3974g00026 15 785 Receptor kinase-like Gene Family AT4G37250 57.179 0.0 825
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gabi3974g00026 Pkinase 1.1e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3974g00026 - - gmx:100776204 1143.64