Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3974g00025 ATGGCTCTCACTGAAGAACCCCAAGATGTACAATACTCTCCCTCATTCCTCGATGCCCTTCTATGTGAAGAGAAAGATACCTTTGAGGACGATTTTGATGCAAACGCTGTTGAGGTTGAGACCAATAACAATGACCCATCTGTGGGAAAGTTGCAATCTTTGCCTTTGGTTTTGCTTGACAATGACTTGTTCTGGGAAGATGAGGAACTTGTCTCCTTAATCTCAAAAGAGGGAGAGACCCATTTGTGTTCTTCTAATCTCATTGCTGATGGAACACTAGAAGGGCCTCGTGTTGAGGCTGTGAGTTGGATTTCTAAAGTTTGTGCATACCATGGATTCTCTGCTTTGACAGCTGTTCTTGCTGTGAACTACTTTGATAGGTTCATCACAAGCCTGAGGTTTGAGAGAGATGAACCATGGATGACACAGCTCTCTGCAGTTGCGTGTTTGTCCCTGGCTGCCAAAATGGAAGAGACCCATGTGCCACTTCTTTTAGACCTGCAAGTGGAGGAATCAAGGTTTGTGTTTGAAGCAAAAACTATACAGAGAATGGAGCTTGTAGTGTTGTCAACTCTTAAATGGAGGATGCATCCGGTGACCCCAATTTCCTTCTTTGAACACATTGTCAGAAGGCTTGGTTTAAAGAGCCGCTTGCATTGGGAATTCCTTTGGCGTTGCGAGCGAGTTCTTCTTAATGTCATTGCGGATTCAAGGGTTATGAGTTATCTTCCTTCTATATTGGCTGCTGCTACAATGATCCATGTTATTAAAGAGATTGAACCTTTAAATGCATCTGAGTACATTGATCAACTTCTGGGTTTGCTAAAGATAAGTGAGGAACAAGTGAACCAGTGCTACAAACTCATACAAGGCATTTACAGTCTTCACCATAAACGCAAGCGCGTATCGGAAACAAGTAGCCCTGGTGGTGTCATTGATGCATCTTTCAGTTTTGATACCTCAAATGATTCATGGACCATGGCATCATCAGTCTCACTTTCAGTGGAGCCACTGTTTAAGAGGAGGAGAGCTCAGGACCAGCAGATGCGGTTGCCTTCTGTTAATCGTGTGTCTATTGATGTTCTTAATAGCCCTCATTAA 1101 0.4332 MALTEEPQDVQYSPSFLDALLCEEKDTFEDDFDANAVEVETNNNDPSVGKLQSLPLVLLDNDLFWEDEELVSLISKEGETHLCSSNLIADGTLEGPRVEAVSWISKVCAYHGFSALTAVLAVNYFDRFITSLRFERDEPWMTQLSAVACLSLAAKMEETHVPLLLDLQVEESRFVFEAKTIQRMELVVLSTLKWRMHPVTPISFFEHIVRRLGLKSRLHWEFLWRCERVLLNVIADSRVMSYLPSILAAATMIHVIKEIEPLNASEYIDQLLGLLKISEEQVNQCYKLIQGIYSLHHKRKRVSETSSPGGVIDASFSFDTSNDSWTMASSVSLSVEPLFKRRRAQDQQMRLPSVNRVSIDVLNSPH 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3974g00025 366 Gene3D - 95 197 - -
Gabi3974g00025 366 Pfam Cyclin, N-terminal domain 96 196 IPR006671 -
Gabi3974g00025 366 FunFam D3-type cyclin 90 197 - -
Gabi3974g00025 366 Pfam Cyclin, C-terminal domain 199 297 IPR004367 -
Gabi3974g00025 366 Gene3D - 198 287 - -
Gabi3974g00025 366 PANTHER CYCLINS 73 300 IPR039361 -
Gabi3974g00025 366 CDD CYCLIN_AtCycD-like_rpt2 199 289 - -
Gabi3974g00025 366 SMART cyclin_7 102 190 IPR013763 -
Gabi3974g00025 366 SUPERFAMILY Cyclin-like 64 197 IPR036915 -
Gabi3974g00025 366 SUPERFAMILY Cyclin-like 181 326 IPR036915 -
Gabi3974g00025 366 FunFam CYCLIN D32 198 287 - -
Gabi3974g00025 366 SMART Cyclin_C_2 199 308 IPR004367 -
Gabi3974g00025 366 CDD CYCLIN_AtCycD-like_rpt1 97 194 - -
Gabi3974g00025 366 ProSitePatterns Cyclins signature. 97 128 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3974g00025 Gabi-Chr3974 315980 318077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3974g00025 1 356 Core Cell Cycle Gene Families AT5G67260 51.648 2.91e-117 344