Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3974g00023 ATGGATCACTCTCAAATTGTAACTATTGAGGATATTGATATGAGTGGAAGTTTAGTATGTGCAGATGATATTGTTGATTTGGAAAAAGACACGGATGAATTTGGAGAAGATGATCTTAGTGAAATCATTGCAAACAAAGATGGTGAATGCAGGGAAGGTAATGCACACGAAATTGTGGAAGATGTTGATACTGAATTAAGCAAGACCCCAATTTTAACTAGAGTTTTTGAGACATCAGAAGATGCTTATGCTTATGCAAAAGGCAAGGGATTTGGAATACGCAAGCAATACCATAATAAGAGTACAATTACAAAACAAATATATAGGTGGAATTATGTTTGCTCGAAGCAAGGTGTCAAGAGACTACATGATAAAAGTGCTGATGTTGATAATGTCAAAAGGCAAAGGGATACAAGGACTAATTGTTTGGCAATGTTACAAGTAAAGTTGGTGGATGGCCTATGGAAAGTGGAGAAATTCAATGATATACACAATCATCCATTGATTAACATTCCAACAAAGGTGAAGAAGTTTCTTTCTCAGAATGAATTGAGACACTCGAATTTGACAAAATCTGTTGTTTCTAAGCTATATCAAGAGGGTTTAACATCTTCGAAAATCTCAAAGGTTGTGAGCGCTATGAACAAAGAGGTTAATCTTACTCCCGTTCAAATCAATAGTATTATATCTAGCCAGCGAAAGAATAATGTGGGGCGAGAATGTCAGGGCATCATCAAACACTTTCAAAAGAAGTCCATGGTTGATGGAGCTTTTTATTTTGATATGGATTTGGCAGAAGATGGAACATTAAGAAGCGTATTCTGGGCAGATGGTAGGTCAAGAACTGCATATGCTCATTTTGGTGAAGTCCTTGTCTTTGATGTGACTTACAAAACAAACAAGTTCAGGTTTCCTTTTGCTCCTTTTGTGGGGGTTAATCACCATGGGCAAACAATTTTATTTGCTGCCGCTTTGTTAGAAGATGAAACGGAGGCAACATTTACGTGGTTGTTTGAACAATTTCGGACATGTATGTTTGACAAGTCTCATGTTGCTATTATCACTGATCAAGATAAAGCTATGGGAAAAGCAATAGCTAAGATATTTCCAGGAGCACGACATCGTTTTTGTGCTTGGCATATAAAGAAACATGTTATGGAGCATAGTCAAGCACTGTGCGCACAATTTAAGGATAGTTTTGATGTTGACTTCCGTGCATGGTATAAAAGTTGA 1233 0.369 MDHSQIVTIEDIDMSGSLVCADDIVDLEKDTDEFGEDDLSEIIANKDGECREGNAHEIVEDVDTELSKTPILTRVFETSEDAYAYAKGKGFGIRKQYHNKSTITKQIYRWNYVCSKQGVKRLHDKSADVDNVKRQRDTRTNCLAMLQVKLVDGLWKVEKFNDIHNHPLINIPTKVKKFLSQNELRHSNLTKSVVSKLYQEGLTSSKISKVVSAMNKEVNLTPVQINSIISSQRKNNVGRECQGIIKHFQKKSMVDGAFYFDMDLAEDGTLRSVFWADGRSRTAYAHFGEVLVFDVTYKTNKFRFPFAPFVGVNHHGQTILFAAALLEDETEATFTWLFEQFRTCMFDKSHVAIITDQDKAMGKAIAKIFPGARHRFCAWHIKKHVMEHSQALCAQFKDSFDVDFRAWYKS 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3974g00023 410 PANTHER OS01G0519700 PROTEIN 61 398 - -
Gabi3974g00023 410 Pfam FAR1 DNA-binding domain 84 169 IPR004330 -
Gabi3974g00023 410 Pfam MULE transposase domain 290 383 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3974g00023 Gabi-Chr3974 265701 266933 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi3974g00023 MULE 2.1e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3974g00023 - - ecad:122594423 362.459