Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3974g00015 ATGGCACCATTTGACCACTGTAACCTATTGCTCTCTGCCTCTCTCTCTCTCTCTATATCCCTCCTTTTTTGTCAACACTCTCTCTCTCTCTATCTCCTTCATTTCTTTGTATCTCTTTTTTCCTTCTTCTTCATCTTTGATGGTGTTGCTGCAACTATGGCTGTAGAGCTCATGATGGGTTACAGTAACGAAAATTTCACAACCAAAGCTGAAGAGAATGCTGTCCAAGAAGCTGCATCTGGTTTAGAGAGCGTGGAGAAGCTAATCAGGTTGCTTTCTCAGACTCGTCAACAGTACCATTCTTCTTCTTCATCTTCAGACCCTTCGATGGAAATAGAAATGGATTGCAGAGCTGTAGCTGACGTCGCCGTTTCGAAGTTCAAGAAGGTGATTTCGCTTCTGGGTAGAACCAGAACCGGCCACGCTCGCTTCAGAAGAGCCCCTTTGGCTCCTTCTGCACAAACCCTAGAAACAACACAACCTTCTGAACAACACAGAGTCTACCATGCAACCCCTTTGCAGCAGATCCCATCCACACCAACACCCACCCTTCTTCACCACAACACCGAACCCCCAAAAATTGATAGGAAGGACTCGTCCAAGACCATTAACTTCTCCTATTCTTCTTCTCCTGCTGCCAATTCCTTCATCTCGTCTCTCACCGGCGACACCGATACGAAACAACCGTCGTCGTCGGCGACGGCCGCCACGACGACGACGACGGCTTTTCAGATCACGAATCTGTCTCAGGTTTCATCAGCGGGGAAGCCTCCTCTTTCGTCTTCTTCGTTTAAGAGAAAGTGCAGCTCTGAGAATTTGGGTTCTGGCAAGTGTGGTAGTTCCTCTAGCCGCTGTCATTGTTCGAAAAAGAGCAGGAAAATGAGGTTGAAGAGGGTGATGAGAGTACCTGCGATAAGTTTGAAGATGTCTGATATTCCACCAGATGATTATTCTTGGAGAAAGTATGGACAGAAACCTATTAAAGGATCCCCACATCCAAGGGGTTACTACAAGTGCAGCAGTGTTAGAGGGTGTCCAGCGCGCAAACATGTAGAGCGAGCTCTTGATGATCCATCTATGCTGGTTGTTACCTATGAAGGAGAGCATAATCACTCCCTCTCCGCGGCTGATGCTACTAATCTCATTCTAGAATCATCTTAA 1161 0.4694 MAPFDHCNLLLSASLSLSISLLFCQHSLSLYLLHFFVSLFSFFFIFDGVAATMAVELMMGYSNENFTTKAEENAVQEAASGLESVEKLIRLLSQTRQQYHSSSSSSDPSMEIEMDCRAVADVAVSKFKKVISLLGRTRTGHARFRRAPLAPSAQTLETTQPSEQHRVYHATPLQQIPSTPTPTLLHHNTEPPKIDRKDSSKTINFSYSSSPAANSFISSLTGDTDTKQPSSSATAATTTTTAFQITNLSQVSSAGKPPLSSSSFKRKCSSENLGSGKCGSSSSRCHCSKKSRKMRLKRVMRVPAISLKMSDIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGEHNHSLSAADATNLILESS 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3974g00015 386 Gene3D WRKY domain 300 374 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi3974g00015 386 Pfam WRKY DNA -binding domain 315 371 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3974g00015 386 MobiDBLite consensus disorder prediction 251 285 - -
Gabi3974g00015 386 FunFam WRKY transcription factor 65 297 374 - -
Gabi3974g00015 386 Pfam Plant zinc cluster domain 265 311 IPR018872 -
Gabi3974g00015 386 ProSiteProfiles WRKY domain profile. 308 374 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3974g00015 386 MobiDBLite consensus disorder prediction 152 186 - -
Gabi3974g00015 386 SUPERFAMILY WRKY DNA-binding domain 311 373 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi3974g00015 386 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 75 379 IPR044810 GO:0003700
Gabi3974g00015 386 MobiDBLite consensus disorder prediction 251 286 - -
Gabi3974g00015 386 SMART WRKY_cls 313 373 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3974g00015 386 MobiDBLite consensus disorder prediction 144 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3974g00015 Gabi-Chr3974 157672 159510 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3974g00015 71 371 WRKY Transcription Factor Family AT2G24570 44.514 3.88e-73 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi3974g00015 WRKY 4e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3974g00015 - - qsa:O6P43_024608 450.669