Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3974g00014 ATGGCACCATTTGACCACTGTAACCTATTGCTCTCTGCCTCTCTCTCTCTCTCTATATCCCTCCTTTTTTGTCAACACTCTCTCTCTCTCTATCTCCTTCATTTCTTTGTATCTCTTTTTTCCTTCTTCTTCATCTTTGATGGTGTTGCTGCAACTATGGCTGTAGAGCTCATGATGGGTTACAGTAACGAAAATTTCACAACCAAAGCTGAAGAGAATGCTGTCCAAGAAGCTGCATCTGGTTTAGAGAGCGTGGAGAAGCTAATCAGGTTGCTTTCTCAGACTCGTCAACAGTACCATTCTTCTTCTTCATCTTCAGACCCTTCGATGGAAATAGAAATGGATTGCAGAGCTGTAGCTGACGTCGCCGTTTCGAAGTTCAAGAAGGTGATTTCGCTTCTGGGTAGAACCAGAACCGGCCACGCTCGCTTCAGAAGAGCCCCTTTGGCTCCTTCTGCACAAACCCTAGAAACAACACAACCTTCTGAACAACACAGAGTCTACCATGCAACCCCTTTGCAGCAGATCCCATCCACACCAACACCCACCCTTCTTCACCACAACACCGAACCCCCAAAAATTGATAGGAAGGACTCGTCCAAGACCATTAACTTCTCCTATTCTTCTTCTCCTGCTGCCAATTCCTTCATCTCGTCTCTCACCGGCGACACCGATACGAAACAACCGTCGTCGTCGGCGACGGCCGCCACGACGACGACGACGGCTTTTCAGATCACGAATCTGTCTCAGGTTTCATCAGCGGGGAAGCCTCCTCTTTCGTCTTCTTCGTTTAAGAGAAAGTGCAGCTCTGAGAATTTGGGTTCTGGCAAGTGTGGTAGTTCCTCTAGCCGCTGTCATTGTTCGAAAAAGAGGAAAATGAGGTTGAAGAGGGTGATGAGAGTACCTGCGATAAGTTTGAAGATGTCTGATATTCCACCAGATGATTATTCTTGGAGAAAGTATGGACAGAAACCTATTAAAGGATCCCCACATCCAAGGGGTTACTACAAGTGCAGCAGTGTTAGAGGGTGTCCAGCGCGCAAACATGTAGAGCGAGCTCTTGATGATCCATCTATGCTGGTTGTTACCTATGAAGGAGAGCATAATCACTCCCTCTCCGCGGCTGATGCTACTAATCTCATTCTAGAATCATCTTAA 1158 0.4689 MAPFDHCNLLLSASLSLSISLLFCQHSLSLYLLHFFVSLFSFFFIFDGVAATMAVELMMGYSNENFTTKAEENAVQEAASGLESVEKLIRLLSQTRQQYHSSSSSSDPSMEIEMDCRAVADVAVSKFKKVISLLGRTRTGHARFRRAPLAPSAQTLETTQPSEQHRVYHATPLQQIPSTPTPTLLHHNTEPPKIDRKDSSKTINFSYSSSPAANSFISSLTGDTDTKQPSSSATAATTTTTAFQITNLSQVSSAGKPPLSSSSFKRKCSSENLGSGKCGSSSSRCHCSKKRKMRLKRVMRVPAISLKMSDIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGEHNHSLSAADATNLILESS 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3974g00014 385 Pfam Plant zinc cluster domain 265 310 IPR018872 -
Gabi3974g00014 385 ProSiteProfiles WRKY domain profile. 307 373 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3974g00014 385 FunFam WRKY transcription factor 65 296 373 - -
Gabi3974g00014 385 Gene3D WRKY domain 299 373 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi3974g00014 385 MobiDBLite consensus disorder prediction 251 285 - -
Gabi3974g00014 385 MobiDBLite consensus disorder prediction 251 283 - -
Gabi3974g00014 385 Pfam WRKY DNA -binding domain 314 370 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3974g00014 385 MobiDBLite consensus disorder prediction 152 186 - -
Gabi3974g00014 385 SUPERFAMILY WRKY DNA-binding domain 310 372 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi3974g00014 385 SMART WRKY_cls 312 372 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3974g00014 385 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 75 378 IPR044810 GO:0003700
Gabi3974g00014 385 MobiDBLite consensus disorder prediction 144 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3974g00014 Gabi-Chr3974 157672 159510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3974g00014 71 370 WRKY Transcription Factor Family AT2G24570 44.340 1.87e-73 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi3974g00014 WRKY 4e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3974g00014 - - qsa:O6P43_024608 450.669