Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3974g00009 ATGGTACCTTCAGACGCGGTGTCCCTATTGTCGTTCAAGAGGGAAGCAGACTTAGACGACAAGCTCCTCTACACACTGAACGAGCCATACGACTATTGCGAATGGCAGGGCGTGAAATGCGCACAGGGAAGGGTTGTACGCTTCGTCGTTCAAGACATGGGCCTCCGCGGCCTCTTTCCCTCCAACACCCTAACTCGCCTCGACCAGCTCCGAGTCATGAGTCTCCGTAACAACTCGCTATTCGGACCCATTCCGGATCTGTCACCACTCATCAACCTCAAGTCTCTTTTTCTTGATCATAACCATTTCTCGGGTTCTTTCCCTCCTTCAATACTCTTTCTTCACCGAATCCTCACTCTCTCATTATCACACAACAACCTCACCGGTCCAGTTCCGGTTCAACTCACCCTCCTCGACCGCCTCATTTCCCTCCGGCTCGACTCTAACTCCTTCTCCGGTTCACTTCCCCCGCTGAACCAGACCGCGCTCAGAGTCTTCAACATCTCCAATAACAACCTCACCGGTCCGGTTCCTGTCACTCCGACACTTTCTCGTTTCCACGCGACGTCGTTTTTGGGAAACCCTGGTCTCTGCGGGGAGATTCTTCACAAGCAGTGTGACTCTCATTCTCGATTCTTTGGTTCATCCAACAACACCGCCTCCTCTTCCGCGCCGTTAGGCCAGAACGAAGAGTCAACCGGCATTGTTGTGGTTACTGTTACTTCCCCTACCCAGAAGAAGCATAAAAAAACCGGTTTGGCTCTCGGGTTCACCGTTGGGGTTGCTGTTCTCGCTGCCTTTGCTTTTGTGATCGCGTTGGTTAAGAAACAGAAACAGAAACAGAATCAGAATCAGAATCAGAAACAGAAAGGGTCGAGAAAAATGGAAGCTTTAGAAAGTACCCCTCCGGTGACTACGGTGGTGGAGATGCGGAATGAGGAATTGAAGGTGAAATTGGAGGAGGCGCATAAGAGTGGGAAGCTAGTGTTCTGCTGCGGGGAGGTGCAAAATTACACGCTGGAGCAGCTCATGAGGGCTTCGGCGGAACTGCTTGGAAGGGGTAGTTTGGGAACAACGTACAAGGCGGTGTTGGATTCGCATTTGATCTTGACGGTGAAGAGGTTGGATGCTGGGAAAACTGCGGTGACGAGTGGGGAAGTGTTTGAAAAACGCATGGAGATGGTCGGTAGGCTTCGACACCCTAATTTGATTCCTTTGAGGGCTTATTTTCAGGCAAAGGGAGAGAGACTTATTATATATGATTATCAACCTAATGGCAGTCTATTCAACCTTGTTCATGGTTCAAGATCAGCAAGGGCTAAGCCCCTCCATTGGACATCATGTTTAAAAATTGCCGAAGATGTAGCCCATGGACTTGCATATATGCACCAAGCTTCGTCTTTAATTCATGGCAACCTAAAGTCCTCTAATGTCCTTCTTGGAGTGGACTTTGAAGCTTGTATTACGGACTATAGTTTGGCCTTCCTTGCAGGCCCGTCTTCATTCACCGAGGATCCTGATTCTGCTGCATATAAAGCACCAGAGGTTCGAAAGTCTAGCCGCAGGGCCACTTCCAAGTCTGATGTGTATGCTTTTGGGGTGCTTCTGCTGGAGCTTTTGACGGGTAAACATCCTTCCCAACATCCTTTCCTTGTGCCAACGGATTTGCAAGATTGGGTTAGAGCAATGAGGGATGATGATGGTTGTGAAGATAACCGGCTAGAAATGCTCACAGAGGTTGCCAGTATTTGCAGTGCAACCTCGCCGGAGCAGAGGCCAGCAATGTGGCAAGTCCTTAAGATGATACAAGGAATAAAGGACAGTGTTGCTATGGAGGACACTACACTTACTGGACTCTAA 1860 0.4941 MVPSDAVSLLSFKREADLDDKLLYTLNEPYDYCEWQGVKCAQGRVVRFVVQDMGLRGLFPSNTLTRLDQLRVMSLRNNSLFGPIPDLSPLINLKSLFLDHNHFSGSFPPSILFLHRILTLSLSHNNLTGPVPVQLTLLDRLISLRLDSNSFSGSLPPLNQTALRVFNISNNNLTGPVPVTPTLSRFHATSFLGNPGLCGEILHKQCDSHSRFFGSSNNTASSSAPLGQNEESTGIVVVTVTSPTQKKHKKTGLALGFTVGVAVLAAFAFVIALVKKQKQKQNQNQNQKQKGSRKMEALESTPPVTTVVEMRNEELKVKLEEAHKSGKLVFCCGEVQNYTLEQLMRASAELLGRGSLGTTYKAVLDSHLILTVKRLDAGKTAVTSGEVFEKRMEMVGRLRHPNLIPLRAYFQAKGERLIIYDYQPNGSLFNLVHGSRSARAKPLHWTSCLKIAEDVAHGLAYMHQASSLIHGNLKSSNVLLGVDFEACITDYSLAFLAGPSSFTEDPDSAAYKAPEVRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPFLVPTDLQDWVRAMRDDDGCEDNRLEMLTEVASICSATSPEQRPAMWQVLKMIQGIKDSVAMEDTTLTGL 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3974g00009 619 Gene3D Ribonuclease Inhibitor 3 159 IPR032675 -
Gabi3974g00009 619 ProSiteProfiles Protein kinase domain profile. 345 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3974g00009 619 SUPERFAMILY Protein kinase-like (PK-like) 349 607 IPR011009 -
Gabi3974g00009 619 Gene3D Phosphorylase Kinase; domain 1 310 422 - -
Gabi3974g00009 619 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 4 607 IPR046959 -
Gabi3974g00009 619 Gene3D Ribonuclease Inhibitor 160 209 IPR032675 -
Gabi3974g00009 619 Gene3D Transferase(Phosphotransferase) domain 1 424 616 - -
Gabi3974g00009 619 FunFam Probable inactive receptor kinase At5g67200 4 114 - -
Gabi3974g00009 619 FunFam Leucine-rich repeat receptor-like protein kinase 116 208 - -
Gabi3974g00009 619 Pfam Protein kinase domain 348 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3974g00009 619 MobiDBLite consensus disorder prediction 280 302 - -
Gabi3974g00009 619 SUPERFAMILY L domain-like 3 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3974g00009 Gabi-Chr3974 121628 124079 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3974g00009 1 613 Receptor kinase-like Gene Family AT3G50230 52.730 0.0 647
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gabi3974g00009 Pkinase 8.2e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3974g00009 - - gmx:100783086 889.412