Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3974g00008 ATGGGAACTGGATATAGTGACAATTATCAGAATGGATTAATTCCTCAGGTTATGAATGCCTTGTTCAACAAGATAGAAACACTAAAACATCAAGCAGAATTTCAGTTGCATGTCTCCTTCATTGAGATTTTGAAGGAAGAGGTGAACGACTTGTTGGATACAGTATCTATGGGCAAACCAGAAACCTCTAATGGCCATTATGGAAAAGTAACTATTCCCGGGAAGTCACCAATACAGATTCGTGAAACATCAAATGGAGTAATAACACTGGCAGGGTCAACTGAAGTTGCTGTAAGTACATTGCAGGAGATGGCTGCTTGCTTGGAGCAGGGTTCCTTAAGTAGGGCAACAGGAAGTACAAATATGAACAACCAGTCCAGTCGGTCACATGCCATCTTCACAATTACATTAGAACAGATGCACAAGCTCCATTCAGTTTCTCCCAGCAATGACACTTCAGATGCGGATATGGGTGAAGAATACCTTTCAGCAAAGCTTCATTTAGTAGATCTAGCTGGATCAGAACGAGCCAAAAGAACAGGTTCTGATGGTATTCGTTTAAAAGAAGGCATACACATCAATAGAGGTCTTCTTGCACTTGGTAATGTCATAAGTGCACTGGGAGATGAGAAAAAGCGAAAGGAGGGTGTGCACGTCCCTTATCGGGATAGCAAGCTTACTCGACTCTTACAGGATTCACTCGGTGGAAACAGCAAAACTGTCATGATAGCTTGCATTAGCCCTGCTGACATAAATGCTGAGGAAACTCTTAATACACTCAAATATGCAAACCGTGCACGCAATATTCAAAATAAGCCTGTTGCTAATCGAGATTTAATATCCAATGAGATGCAGCAAATGCGCCAGCAGTTAAAGTACTTGCAGGCTGAACTCTGTTCTAGGGGAGGAGCTCCAGCTGATGAAACTCGGGTTCTTAAGGAAAGGATTGCTTGGCTTGAGGCAACTAATGAGGAACTCTGTCGAGAACTTCATGAATATCGCAGTAGATGTGCTTTTGTAGAGAGATGTGAAATTGATGAACCAGATGGACATATTTATCTCGTCAAAAATGATGGGATTGAGAGACACTTTCAGAGCTCAGATTCATCTGACCATCCCATGACTGAAAGTATATCAGGGGAGGAATCAAGGGAAACTGATGAAGCAGCAAAAGAGTTCGAGCATGCACTCTTGCAGAATACCATGGATAAAGAGATGAATGAGTTAAATAAGCGCTTGGAGCAGAAAGAGTCTGAGATGAAGCTCATGGGAGTTGATACTGAAGCACTCAAACTGCATTTCGGGAAGAAAATTATGGAACTTGAGGAAGAGAAAAGAAAAGTGCAGCAACAAAGGGACCGTTTGTTGCATGAGGTAGAGAATCTTGCTGCTAATTCAGATGGACTAGCACAGAAAACTCAAGATGTTCGTGGCCAAAAATTGAAAGCATTGGAAGCACAGATTTTAGACCTCAAGAAGAAACAAGAAAGCCAGGTTCAGCTACTAAAGCAAAAGGAGAAGAGTGAAGAAGCTGCAAAGCGACTGCAAGCTGAAATACAGTATATCAAGGCTCAGAAGGTTCAGTTGCAGCATAAAATGAAGCAAGAGGCAGAACAATTTCGACAATGGAAGGCATCTCGTGAGAAGGAGTTACTCCAGTTGAAAAAGGAGGGAAGAAGGAATGAGTATGAAAGACATAAACTTGAGGCTCTAAACCAGCGGCAAAAACTGGTTCTTCAAAGGAAGACAGAGGAAGCAACAATGGCTACGAAAAGGCTAAAAGAATTGTTGGAAGCCCGTAAATCTTCTGCACGTGACAACTCTGTTTATTCAAATGGACATCTCCAGCCTGGACAGGTCAATGAAAAATCCCTCCTGAGGTGGCTTGATCATGAGCTGGAGGTCATGGTACATGTGCATGAAGTCCGTGCTGAATTTGATAAACAAAGCCAAGTGCAAGCTGCACTGGAAGAAGAGTTGACTTTACTGAAACAAACGGATCAGTTTTCAGATGGGCAGAGTATCTCCATCGGAAAGAGCAGCTATTCGACACTATTATCCATGTCACCAGATGTAAAAGTTGCGAGAATAGCTTCTCTTGAGAATATGCTGGGCATGTCTTCAGTTGCTTTGAAAGCCATGGCTTCACAACTTACTGAGGCAGAAGAGAGGGAACGTACATTAAATAACCGTGGACGTTGGAACCAGTTACGCTCGATGGGAGATGCAAAGAATGTGCTCCAGTATTTGTTCAATGCTACAGCAGAAGCAAGGTGCCAATTGTGGGAAAAGAATATGGAACTTAAGGACTTGAAAGAGCAACTAAATGAGCTTGTAAGAGTACTACAACAAAGTGAAGCACATAGAATAGAACTTGTAAAGGAGCAAAAAATTAGGGAACAAGCTGTTGCCATCGCATTGAATGCATCAGCATTGGAAAGCTCACGGTCCTTGAAACACCTTGCGGATGAAATGAGTGGTCCATTGTCTCCCATGTCACTTCCTGCACCAAAGCAACTCAAATTCACCCCTGGAGTTGTTAATGGATCAGTCAGGGAGTTTGATACATTTCTAGATGAATCACGAAAGATGATACCCATTGGAGAGTTGTCAACAAAGAGGCTAGCAGCTATAGGACAAGGAGGAAAACTTTGGAGGTGGAAGAGAAGTCATCATCAATGGCTGCTACAGTTTAAATGGAAGTGGCAGAAGCCCTGGAAACTTTCAGAATGGATCAAACACAATGATGAGACAATTATGAGGTCAAGGCCTCGAGCACAAGCTTTGATTAATGTGATGTGA 2802 0.4243 MGTGYSDNYQNGLIPQVMNALFNKIETLKHQAEFQLHVSFIEILKEEVNDLLDTVSMGKPETSNGHYGKVTIPGKSPIQIRETSNGVITLAGSTEVAVSTLQEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMHKLHSVSPSNDTSDADMGEEYLSAKLHLVDLAGSERAKRTGSDGIRLKEGIHINRGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEETLNTLKYANRARNIQNKPVANRDLISNEMQQMRQQLKYLQAELCSRGGAPADETRVLKERIAWLEATNEELCRELHEYRSRCAFVERCEIDEPDGHIYLVKNDGIERHFQSSDSSDHPMTESISGEESRETDEAAKEFEHALLQNTMDKEMNELNKRLEQKESEMKLMGVDTEALKLHFGKKIMELEEEKRKVQQQRDRLLHEVENLAANSDGLAQKTQDVRGQKLKALEAQILDLKKKQESQVQLLKQKEKSEEAAKRLQAEIQYIKAQKVQLQHKMKQEAEQFRQWKASREKELLQLKKEGRRNEYERHKLEALNQRQKLVLQRKTEEATMATKRLKELLEARKSSARDNSVYSNGHLQPGQVNEKSLLRWLDHELEVMVHVHEVRAEFDKQSQVQAALEEELTLLKQTDQFSDGQSISIGKSSYSTLLSMSPDVKVARIASLENMLGMSSVALKAMASQLTEAEERERTLNNRGRWNQLRSMGDAKNVLQYLFNATAEARCQLWEKNMELKDLKEQLNELVRVLQQSEAHRIELVKEQKIREQAVAIALNASALESSRSLKHLADEMSGPLSPMSLPAPKQLKFTPGVVNGSVREFDTFLDESRKMIPIGELSTKRLAAIGQGGKLWRWKRSHHQWLLQFKWKWQKPWKLSEWIKHNDETIMRSRPRAQALINVM 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3974g00008 933 ProSitePatterns Kinesin motor domain signature. 164 175 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gabi3974g00008 933 Gene3D Kinesin motor domain 1 307 IPR036961 -
Gabi3974g00008 933 MobiDBLite consensus disorder prediction 364 386 - -
Gabi3974g00008 933 PRINTS Kinesin heavy chain signature 165 183 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3974g00008 933 PRINTS Kinesin heavy chain signature 219 240 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3974g00008 933 PRINTS Kinesin heavy chain signature 120 137 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3974g00008 933 Coils Coil 438 465 - -
Gabi3974g00008 933 SMART kinesin_4 3 277 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3974g00008 933 Coils Coil 481 532 - -
Gabi3974g00008 933 ProSiteProfiles Kinesin motor domain profile. 1 269 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3974g00008 933 Pfam Kinesin motor domain 7 269 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3974g00008 933 Coils Coil 316 336 - -
Gabi3974g00008 933 Coils Coil 711 731 - -
Gabi3974g00008 933 Coils Coil 277 297 - -
Gabi3974g00008 933 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 819 IPR027640 GO:0003777|GO:0007018
Gabi3974g00008 933 FunFam Kinesin-like protein 87 290 - -
Gabi3974g00008 933 Coils Coil 399 426 - -
Gabi3974g00008 933 Coils Coil 761 788 - -
Gabi3974g00008 933 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 300 IPR027417 -
Gabi3974g00008 933 Coils Coil 579 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3974g00008 Gabi-Chr3974 109959 120522 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3974g00008 3 302 Calmodulin-binding Proteins AT5G65930 35.000 1.47e-43 170