Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3974g00007 ATGGAAACATCGGAGAATTGCTCTGTGAAAGTTGCTCTTCACATTCGTCCCCTCATTGCCGATGAACGACAACAAGGTTGCTCTGAATGTGTTTCCGTTACACCTGGAAAGCCTCAGGTTCAAATTGGGTCACACTCCTTTACATTTGATCATGTTTATGGAAATGGTGGGTCTCCTTCAGCTGACATGTTTGAGGAATGCATTGCTCCATTGGTTGATGGCTTATTCCAAGGATACAATGCTACTGTACTTGCTTATGGTCAGACAGGATCTGGGAAAACGTATACCATGGGAACTGGATATAGTGACAATTATCAGAATGGATTAATTCCTCAGGTTATGAATGCCTTGTTCAACAAGATAGAAACACTAAAACATCAAGCAGAATTTCAGTTGCATGTCTCCTTCATTGAGATTTTGAAGGAAGAGGTGAACGACTTGTTGGATACAGTATCTATGGGCAAACCAGAAACCTCTAATGGCCATTATGGAAAAGTAACTATTCCCGGGAAGTCACCAATACAGATTCGTGAAACATCAAATGGAGTAATAACACTGGCAGGGTCAACTGAAGTTGCTGTAAGTACATTGCAGGAGATGGCTGCTTGCTTGGAGCAGGGTTCCTTAAGTAGGGCAACAGGAAGTACAAATATGAACAACCAGTCCAGTCGGTCACATGCCATCTTCACAATTACATTAGAACAGATGCACAAGCTCCATTCAGTTTCTCCCAGCAATGACACTTCAGATGCGGATATGGGTGAAGAATACCTTTCAGCAAAGCTTCATTTAGTAGATCTAGCTGGATCAGAACGAGCCAAAAGAACAGGTTCTGATGGTATTCGTTTAAAAGAAGGCATACACATCAATAGAGGTCTTCTTGCACTTGGTAATGTCATAAGTGCACTGGGAGATGAGAAAAAGCGAAAGGAGGGTGTGCACGTCCCTTATCGGGATAGCAAGCTTACTCGACTCTTACAGGATTCACTCGGTGGAAACAGCAAAACTGTCATGATAGCTTGCATTAGCCCTGCTGACATAAATGCTGAGGAAACTCTTAATACACTCAAATATGCAAACCGTGCACGCAATATTCAAAATAAGCCTGTTGCTAATCGAGATTTAATATCCAATGAGATGCAGCAAATGCGCCAGCAGTTAAAGTACTTGCAGGCTGAACTCTGTTCTAGGGGAGGAGCTCCAGCTGATGAAACTCGGGTTCTTAAGGAAAGGATTGCTTGGCTTGAGGCAACTAATGAGGAACTCTGTCGAGAACTTCATGAATATCGCAGTAGATGTGCTTTTGTAGAGAGATGTGAAATTGATGAACCAGATGGACATATTTATCTCGTCAAAAATGATGGGATTGAGAGACACTTTCAGAGCTCAGATTCATCTGACCATCCCATGACTGAAAGTATATCAGGGGAGGAATCAAGGGAAACTGATGAAGCAGCAAAAGAGTTCGAGCATGCACTCTTGCAGAATACCATGGATAAAGAGATGAATGAGTTAAATAAGCGCTTGGAGCAGAAAGAGTCTGAGATGAAGCTCATGGGAGTTGATACTGAAGCACTCAAACTGCATTTCGGGAAGAAAATTATGGAACTTGAGGAAGAGAAAAGAAAAGTGCAGCAACAAAGGGACCGTTTGTTGCATGAGGTAGAGAATCTTGCTGCTAATTCAGATGGACTAGCACAGAAAACTCAAGATGTTCGTGGCCAAAAATTGAAAGCATTGGAAGCACAGATTTTAGACCTCAAGAAGAAACAAGAAAGCCAGGTTCAGCTACTAAAGCAAAAGGAGAAGAGTGAAGAAGCTGCAAAGCGACTGCAAGCTGAAATACAGTATATCAAGGCTCAGAAGGTTCAGTTGCAGCATAAAATGAAGCAAGAGGCAGAACAATTTCGACAATGGAAGGCATCTCGTGAGAAGGAGTTACTCCAGTTGAAAAAGGAGGGAAGAAGGAATGAGTATGAAAGACATAAACTTGAGGCTCTAAACCAGCGGCAAAAACTGGTTCTTCAAAGGAAGACAGAGGAAGCAACAATGGCTACGAAAAGGCTAAAAGAATTGTTGGAAGCCCGTAAATCTTCTGCACGTGACAACTCTGTTTATTCAAATGGACATCTCCAGCCTGGACAGGTCAATGAAAAATCCCTCCTGAGGTGGCTTGATCATGAGCTGGAGGTCATGGTACATGTGCATGAAGTCCGTGCTGAATTTGATAAACAAAGCCAAGTGCAAGCTGCACTGGAAGAAGAGTTGACTTTACTGAAACAAACGGATCAGTTTTCAGATGGGCAGAGTATCTCCATCGGAAAGAGCAGCTATTCGACACTATTATCCATGTCACCAGATGTAAAAGTTGCGAGAATAGCTTCTCTTGAGAATATGCTGGGCATGTCTTCAGTTGCTTTGAAAGCCATGGCTTCACAACTTACTGAGGCAGAAGAGAGGGAACGTACATTAAATAACCGTGGACGTTGGAACCAGTTACGCTCGATGGGAGATGCAAAGAATGTGCTCCAGTATTTGTTCAATGCTACAGCAGAAGCAAGGTGCCAATTGTGGGAAAAGAATATGGAACTTAAGGACTTGAAAGAGCAACTAAATGAGCTTGTAAGAGTACTACAACAAAGTGAAGCACATAGAATAGAACTTGTAAAGGAGCAAAAAATTAGGGAACAAGCTGTTGCCATCGCATTGAATGCATCAGCATTGGAAAGCTCACGGTCCTTGAAACACCTTGCGGATGAAATGAGTGGTCCATTGTCTCCCATGTCACTTCCTGCACCAAAGCAACTCAAATTCACCCCTGGAGTTGTTAATGGATCAGTCAGGGAGTTTGATACATTTCTAGATGAATCACGAAAGATGATACCCATTGGAGAGTTGTCAACAAAGAGGCTAGCAGCTATAGGACAAGGAGGAAAACTTTGGAGGTGGAAGAGAAGTCATCATCAATGGCTGCTACAGTTTAAATGGAAGTGGCAGAAGCCCTGGAAACTTTCAGAATGGATCAAACACAATGATGAGACAATTATGAGGTCAAGGCCTCGAGCACAAGCTTTGATTAATGTGATGTGA 3090 0.4259 METSENCSVKVALHIRPLIADERQQGCSECVSVTPGKPQVQIGSHSFTFDHVYGNGGSPSADMFEECIAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGYSDNYQNGLIPQVMNALFNKIETLKHQAEFQLHVSFIEILKEEVNDLLDTVSMGKPETSNGHYGKVTIPGKSPIQIRETSNGVITLAGSTEVAVSTLQEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMHKLHSVSPSNDTSDADMGEEYLSAKLHLVDLAGSERAKRTGSDGIRLKEGIHINRGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEETLNTLKYANRARNIQNKPVANRDLISNEMQQMRQQLKYLQAELCSRGGAPADETRVLKERIAWLEATNEELCRELHEYRSRCAFVERCEIDEPDGHIYLVKNDGIERHFQSSDSSDHPMTESISGEESRETDEAAKEFEHALLQNTMDKEMNELNKRLEQKESEMKLMGVDTEALKLHFGKKIMELEEEKRKVQQQRDRLLHEVENLAANSDGLAQKTQDVRGQKLKALEAQILDLKKKQESQVQLLKQKEKSEEAAKRLQAEIQYIKAQKVQLQHKMKQEAEQFRQWKASREKELLQLKKEGRRNEYERHKLEALNQRQKLVLQRKTEEATMATKRLKELLEARKSSARDNSVYSNGHLQPGQVNEKSLLRWLDHELEVMVHVHEVRAEFDKQSQVQAALEEELTLLKQTDQFSDGQSISIGKSSYSTLLSMSPDVKVARIASLENMLGMSSVALKAMASQLTEAEERERTLNNRGRWNQLRSMGDAKNVLQYLFNATAEARCQLWEKNMELKDLKEQLNELVRVLQQSEAHRIELVKEQKIREQAVAIALNASALESSRSLKHLADEMSGPLSPMSLPAPKQLKFTPGVVNGSVREFDTFLDESRKMIPIGELSTKRLAAIGQGGKLWRWKRSHHQWLLQFKWKWQKPWKLSEWIKHNDETIMRSRPRAQALINVM 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3974g00007 1029 SMART kinesin_4 6 373 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3974g00007 1029 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 396 IPR027417 -
Gabi3974g00007 1029 MobiDBLite consensus disorder prediction 460 482 - -
Gabi3974g00007 1029 ProSiteProfiles Kinesin motor domain profile. 8 365 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3974g00007 1029 CDD KISc_KIF4 7 366 - -
Gabi3974g00007 1029 Coils Coil 807 827 - -
Gabi3974g00007 1029 Pfam Kinesin motor domain 15 365 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3974g00007 1029 Coils Coil 373 393 - -
Gabi3974g00007 1029 Coils Coil 534 561 - -
Gabi3974g00007 1029 PRINTS Kinesin heavy chain signature 261 279 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3974g00007 1029 PRINTS Kinesin heavy chain signature 216 233 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3974g00007 1029 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3974g00007 1029 PRINTS Kinesin heavy chain signature 315 336 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3974g00007 1029 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 915 IPR027640 GO:0003777|GO:0007018
Gabi3974g00007 1029 Coils Coil 675 695 - -
Gabi3974g00007 1029 Coils Coil 577 628 - -
Gabi3974g00007 1029 ProSitePatterns Kinesin motor domain signature. 260 271 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gabi3974g00007 1029 FunFam kinesin-like protein KIN-4A isoform X1 2 393 - -
Gabi3974g00007 1029 Coils Coil 495 522 - -
Gabi3974g00007 1029 Coils Coil 412 432 - -
Gabi3974g00007 1029 Coils Coil 857 884 - -
Gabi3974g00007 1029 Gene3D Kinesin motor domain 1 393 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3974g00007 Gabi-Chr3974 108268 120522 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3974g00007 9 398 Calmodulin-binding Proteins AT5G65930 34.010 1.05e-54 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3974g00007 - - gmx:100790341 1784.23