Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3968g00062 ATGATCACCACCATTAACAGGAGTAGTAGTGAGCGATTTAGCATTTTAGAGTTTATAGCATGTGTAATACGAGGTCGATGGTTCATGGTTTCTGCCTCCTTCTTTATCATGGCAGGAGTTGGTGGTACCTATGTTTTTGGAACTTACTCCAAAGCAATAAAATCTTCACAAGGTTATGATCAAAGCACACTCAACCTTTTGGGGTTTTACAAGGATCTTGGTTCAAATATAGGTCTTCCTGCTGGTCTTATTGCTGAGGTAACCCCTCCATGGTTCGTGCTCCTTCTTGGCTCAGCCATGAACTTTGTTGGCTATTTCATGATCTGGCTGGTTGTCACACATAGAATATCCAAGGCCAAAGTTTGGCAAATGTGCCTTTACATTTTCATAGGTGCTAGTTCTCAGACCTATGCCAACACAGGAGTACTAGTCACGTGTGTCAAGAATTTCCCTGAAAGCCGAGGCATAATATTGGGTCTCTTAAAGGGTTACATTGGACTCAGTGGAGCTATCTTGACACATTTTTATTTGGCCATTTATGGGAATGATTCTGAATCTCTGATCCTTCTTGTTGCATGGTTTCCAGCTGCTATATCAGTGGTGTTTGCATTTGCAATTCGGGTCATGAAGAATGATAGCCAACCAAACGAGCTCAAAATTTTCTACCAAATTTTCTATGCATCACTTGCACTTGCATTGTTTCTCATGGCAATAATCATTGCTCAGCAACAGATTGATTTCTCAAAAGCAGCCTTTGGTGGAAGTGTGACTGTGGTATGTATTCTTCTCTTCATCCCTATGTTAATTGCTATTAGGAATGAGTTCTCACTATGGAATATCAGGAAAAAACATGGGAATACTACAAGTGAGGTTATCATAGAGAAACCACAAACATTTGAATCCAAACAAACACCACCCCATTTAAATTTTTCAGGGGAGGAAAAAGTAGAGGGTCCAACAAAAATATCTTGTTTTGCCAGCATATTAAATAAACCTGAAAGGGGAGAGGATTACTCTATTTTGCAAGCACTATTAAGCACTGACATGTTTCTATTGTCAATTTCATCGTTTACTGGCTTTGGAGCAAGCTTAACAGCAATAGACAATTTGGGACAAATTGGTGAGTCTTTAGGATACCCTGCCAATACTGTAAGATCATTTGTGTCACTTATAAGCATTTGGAATTACTTTGGGAGGGTCTTTGCTGGTTTTGTATCTGAAATTATGCTTCAAAAATACAAATTTCCTCGCACTATGATGTTAACCTTGTCGCTTTTCTTATCATGCACTGGCCACCTTCTTATTGCTTTCCCAGTACCCGGTTCAATCTATGTAGCATCAGTTATAATCGGATTTTCCTATGGTGCACTATTGCTATTGTTCACAGCAATTATTTCTGAACTCTTTGGTCTCAAATACTTTGCCACACTGTCCAATTCTGTTGGTCTGGTTACTCCCCTTGGATCATATATATTTAATGTGAAGGTGACTGGGTTCCTTTATGATAGAGAGGCAAAAAAGCAACTCAAAAAACATGACAGAGAGTTTGTAAAGGGCATGGAATTGACTTGTATTGGAACTGAATGCTACAAGCTTCCTTTCATAATAATGGCATCTGTCACTTTATTTGGAGCACTGGTTTCATTGATTTTGGTGATGAGAACCCGAAAGTTCTACAAATGTGACATTTACAATAAGAAGTTCATAGAGGATGCACATGCAGTTGAAACGGAGTTGAGTACATCCTCGGTTCATGAACATTGA 1764 0.3906 MITTINRSSSERFSILEFIACVIRGRWFMVSASFFIMAGVGGTYVFGTYSKAIKSSQGYDQSTLNLLGFYKDLGSNIGLPAGLIAEVTPPWFVLLLGSAMNFVGYFMIWLVVTHRISKAKVWQMCLYIFIGASSQTYANTGVLVTCVKNFPESRGIILGLLKGYIGLSGAILTHFYLAIYGNDSESLILLVAWFPAAISVVFAFAIRVMKNDSQPNELKIFYQIFYASLALALFLMAIIIAQQQIDFSKAAFGGSVTVVCILLFIPMLIAIRNEFSLWNIRKKHGNTTSEVIIEKPQTFESKQTPPHLNFSGEEKVEGPTKISCFASILNKPERGEDYSILQALLSTDMFLLSISSFTGFGASLTAIDNLGQIGESLGYPANTVRSFVSLISIWNYFGRVFAGFVSEIMLQKYKFPRTMMLTLSLFLSCTGHLLIAFPVPGSIYVASVIIGFSYGALLLLFTAIISELFGLKYFATLSNSVGLVTPLGSYIFNVKVTGFLYDREAKKQLKKHDREFVKGMELTCIGTECYKLPFIIMASVTLFGALVSLILVMRTRKFYKCDIYNKKFIEDAHAVETELSTSSVHEH 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3968g00062 587 SUPERFAMILY MFS general substrate transporter 24 557 IPR036259 -
Gabi3968g00062 587 CDD MFS_Mch1p_like 25 545 - -
Gabi3968g00062 587 Gene3D MFS general substrate transporter like domains 331 575 IPR036259 -
Gabi3968g00062 587 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 27 562 - -
Gabi3968g00062 587 Pfam Nodulin-like 26 271 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3968g00062 Gabi-Chr3968 561875 563638 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3968g00062 16 583 Nodulin-like Gene Family AT2G28120 62.982 0.0 720
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3968g00062 - - gmx:100799928 734.561