Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3968g00058 ATGGCGTCGTTGAAGGTGGATTTGCCACGACAGTGTTCATCCCTTTCGAAGAACATCAACATGGACAACCTCGTCAAGGACAGCGTCGACGAGGTCTGGAAGGAGATCGTTGCCGGCGCTGAAACACAACAGTTGACACTCGAGGATTTCTTGACCAAGGCTGGGTCTGTCAGAGACAATGACGTCACACATAGCATGCTGTCTCCTCACATGGTTGCCAATGCCAAAACGTCATCAAAAGTGCGCGGAAGGGGAAAGAGGAAGAAGACTGTGGAGGAACTCGTCGATAAGGCCACTCTTCAGAGGCAGAGAAGGATGATTAAGAACAGAGAGTCAGCTGCTAGATCCAGGGAACGCAAGCAGGCTTACACAGTTGAGCTAGAGTCTTTGGTTACACATCTGGAGGAAGAAAATGCACGATTGTTACGGGAACAGGATGATAAGAAAAAGCAGAGGCTTAACCAGCTTTTGGAGTGCCTCATTCCAGTTGTGGAGAAGTGTAAACCAAGACGAATGCTTCGGAGAGTGAATTCTGTCCAATGGTGA 546 0.489 MASLKVDLPRQCSSLSKNINMDNLVKDSVDEVWKEIVAGAETQQLTLEDFLTKAGSVRDNDVTHSMLSPHMVANAKTSSKVRGRGKRKKTVEELVDKATLQRQRRMIKNRESAARSRERKQAYTVELESLVTHLEEENARLLREQDDKKKQRLNQLLECLIPVVEKCKPRRMLRRVNSVQW 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3968g00058 181 Gene3D - 100 155 - -
Gabi3968g00058 181 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 19 170 IPR043452 GO:0003700|GO:0045893
Gabi3968g00058 181 Pfam bZIP transcription factor 98 152 IPR004827 GO:0003700|GO:0006355
Gabi3968g00058 181 SMART brlzneu 97 161 IPR004827 GO:0003700|GO:0006355
Gabi3968g00058 181 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 99 157 - -
Gabi3968g00058 181 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 99 151 IPR004827 GO:0003700|GO:0006355
Gabi3968g00058 181 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 104 119 IPR004827 GO:0003700|GO:0006355
Gabi3968g00058 181 Coils Coil 124 154 - -
Gabi3968g00058 181 CDD bZIP_plant_BZIP46 101 145 - -
Gabi3968g00058 181 SUPERFAMILY Leucine zipper domain 101 151 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3968g00058 Gabi-Chr3968 519495 522475 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3968g00058 28 181 bZIP Transcription Factor Family AT5G44080 46.939 3.62e-41 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi3968g00058 bZIP_1 4.1e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3968g00058 K14432 - cave:132166742 177.563