Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3968g00017 ATGGCGAACCATGAAGAAGCAAAGCTCGAAACTTTCGTGCAGTGGCTACAGGCAAATGGGGTGGATCTTCGAGGTTGCAATATCAAGTACAGTGATTCCAGAAAAGGGTTTGGCATCTTTTCTGATAAAGATATTTCTGATGGGGTTCTGTTGGTTGTTCCACTAGATTTAGCAATAACTCCAATGAGGGTGTTGCAAGATCCTCTTCTAGGACCAGAATGTAGAGCATTGTTTGAAGAAGGAGATGTAGATGACAGGTTCTTAATGATGTTGTTACTGACTGTGGAGCGTTTGCGTAAGAATTCTCTATGGAAGCCGTACCTTGATATGCTTCCAACCACTTTTGGAAATCCACTTTGGTTTAGTGATGATGAACTTATAGAGCTAAGAGGAACGACATTATATCGTGCAACTGAATTGCAGAAGAAAAGCCTGCTGTCTTTGTATGAAACTAAAGCGAAGCATTTAGTGAAGAAACTTTTGACTCAGGATGGAGATTCAGAGATTGAGGTGTGCTTTGAAGATTTCCTTTGGGCGAATTCAGTATTTTGGAGCCGTGCTTTGAACATTCCATTGCCTCGTTCTTATGTATTTCCAAAAATGCAAGAAGGTGATGACAGTTGCATTCTAGAAGCTAATGAAAAAAGTAGTGAGGTTAAAAAATCTGACAATCTAACCAAGGAAATGACATGTAACACAGTGCAAGGAGACACTGTTTGGGTAGAGGGTCTTGTCCCTGGCATTGACTTTTGCAACCATGATTTGAAGCCAATAGCAACATGGGAAGTTGACGGAACTGGTTTAACAACAGGAGTTCCTTTCTCCATGTATCTTCTTTCTGCTGCTCAAAGTCCCTTGCAGATTGATCGAGAAATTTCCATCAGTTATGGCAACAAGGGAAATGAGGAACTTCTATATCTATACGGTTTTGTCATTGATGATAACACAGATGACTATCTCATGGTACACTATCCAGCAGAAGCAATTAATACTATTTCTTTTTCAGAGTCCAAAAGCCAGCTTCTTGAAGTGCAGAAAGCTGAAATGAGATGTCTTTTACCCAAAACTTTGCTGGATCATGGATTTTTTCCTTTAGGGACCCAAAACAGTGGAGAAAATAACAAAGGCAAGGTGGATCAAGTTTGCAACTATAGTTGGAGTGGTCAGCGCAAGATGCCATCTTATGTGAACAAGCTGGTTTTTCCTGAGAAATTTATGACTACCTTGAGGACCATAGCCATGCAAGAAGATGAGCTTTTCAAGGTTTCCTCAATGCTGGAAGAGCTTGTTGGACCTGAAGGGCAGAGACAACTATCAGATACAGATGTCCAATCAGCAATATGGGAGGTTTGCGGTGATTCCGGAGCTTTACAATTGCTTGTTGATCTTCTCAATGTGAAGTTGATGGATCTTGAAGAGAGTTCCGGAACAGAGGAAAGTGACCTTGATTTGCTCAAGAAGGCCCTTATTATTGATAGCCAGGAAGATAGCAAACAGTGCATGAGCAATTTAAGCACAGTGACAAATGACTCAGAGGAGTCAAAGTTGATGACTAGAAACAAGTGGTCTGCTATAGTATATCGGCGAGGCCAAAAGCAGCTAACTCGATTATTCTTGAAAGAAGCAGAACATGCTCTGCAGTTATCACTGAACGAAGAAGAGGTGACTGTTCCTTGA 1677 0.4109 MANHEEAKLETFVQWLQANGVDLRGCNIKYSDSRKGFGIFSDKDISDGVLLVVPLDLAITPMRVLQDPLLGPECRALFEEGDVDDRFLMMLLLTVERLRKNSLWKPYLDMLPTTFGNPLWFSDDELIELRGTTLYRATELQKKSLLSLYETKAKHLVKKLLTQDGDSEIEVCFEDFLWANSVFWSRALNIPLPRSYVFPKMQEGDDSCILEANEKSSEVKKSDNLTKEMTCNTVQGDTVWVEGLVPGIDFCNHDLKPIATWEVDGTGLTTGVPFSMYLLSAAQSPLQIDREISISYGNKGNEELLYLYGFVIDDNTDDYLMVHYPAEAINTISFSESKSQLLEVQKAEMRCLLPKTLLDHGFFPLGTQNSGENNKGKVDQVCNYSWSGQRKMPSYVNKLVFPEKFMTTLRTIAMQEDELFKVSSMLEELVGPEGQRQLSDTDVQSAIWEVCGDSGALQLLVDLLNVKLMDLEESSGTEESDLDLLKKALIIDSQEDSKQCMSNLSTVTNDSEESKLMTRNKWSAIVYRRGQKQLTRLFLKEAEHALQLSLNEEEVTVP 558
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gabi3968g00017 558 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 7 497 - -
Gabi3968g00017 558 SUPERFAMILY SET domain 8 315 IPR046341 -
Gabi3968g00017 558 ProSiteProfiles SET domain profile. 24 297 IPR001214 GO:0005515
Gabi3968g00017 558 CDD SET_LSMT 20 311 - -
Gabi3968g00017 558 Gene3D set domain protein methyltransferase, domain 1 5 311 - -
Gabi3968g00017 558 Pfam SET domain 36 297 IPR001214 GO:0005515
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gabi3968g00017 Gabi-Chr3968 154573 162467 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3968g00017 8 224 NAC Transcription Factor Family AT3G56570 26.754 6.04e-07 50.4
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gabi3968g00017 SET 4.1e-08 No_clan
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3968g00017 - - gmx:100777394 975.696