Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi3968g00007 | ATGTTGGGTTCAGGTACCAATTTGGTGACCACGGTCATTGGGTTTTGCATGAGTGCAACCTTCATTGTGTTTGTCTGCACAAGAATAATTTGTGGAAGGCTACGAGGGGGTGTTGAATCTCGGATGATGTATGAGATTGAATCAAGAATTGATATAGAACTGCCAGAGTATCATGTTAATGACCCTGAACAAGAACCTGTTCTGGTTGATGCAATCCCCACTTTGAAGTTCAATCAAGAGGCTTTCAGTTCCATTGAAGATACACAGTGTGTAATATGTTTGGCAGATTACAAAGAAAGAGAAGTATTACGCATTATGCCCAAATGTGGCCACACTTTTCATCTTTCTTGCATTGATACATGGCTGAGAAAACAATCTACCTGTCCAGTATGCCGTCTTCCATTGAAAAACTCTTCTGAAACAAAACATGTGAGACCAGTGACATTTACCATGAGTCAGTATATTGATGATTCTCACACATCAGAAAGGAATGAAGATATTGAGAGGCATGTTGAACCTACTGTTAGTAACTCCTTACAACCAACTTCTGGAGAGCCAGAATCAAGGCAATAA | 573 | 0.3997 | MLGSGTNLVTTVIGFCMSATFIVFVCTRIICGRLRGGVESRMMYEIESRIDIELPEYHVNDPEQEPVLVDAIPTLKFNQEAFSSIEDTQCVICLADYKEREVLRIMPKCGHTFHLSCIDTWLRKQSTCPVCRLPLKNSSETKHVRPVTFTMSQYIDDSHTSERNEDIERHVEPTVSNSLQPTSGEPESRQ | 190 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi3968g00007 | 190 | MobiDBLite | consensus disorder prediction | 158 | 172 | - | - | |
Gabi3968g00007 | 190 | MobiDBLite | consensus disorder prediction | 173 | 190 | - | - | |
Gabi3968g00007 | 190 | MobiDBLite | consensus disorder prediction | 154 | 190 | - | - | |
Gabi3968g00007 | 190 | SUPERFAMILY | RING/U-box | 80 | 139 | - | - | |
Gabi3968g00007 | 190 | PANTHER | OS11G0150450 PROTEIN | 1 | 164 | - | - | |
Gabi3968g00007 | 190 | SMART | ring_2 | 90 | 131 | IPR001841 | - | |
Gabi3968g00007 | 190 | CDD | RING-H2_EL5-like | 89 | 132 | - | - | |
Gabi3968g00007 | 190 | ProSiteProfiles | Zinc finger RING-type profile. | 90 | 132 | IPR001841 | - | |
Gabi3968g00007 | 190 | Pfam | Ring finger domain | 89 | 132 | IPR001841 | - | |
Gabi3968g00007 | 190 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 65 | 142 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi3968g00007 | Gabi-Chr3968 | 105445 | 107285 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi3968g00007 | 52 | 135 | C3H Transcription Factor Family | AT4G33565 | 38.095 | 1.47e-19 | 83.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi3968g00007 | - | - | ccaj:109802319 | 352.829 |