Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3968g00007 ATGTTGGGTTCAGGTACCAATTTGGTGACCACGGTCATTGGGTTTTGCATGAGTGCAACCTTCATTGTGTTTGTCTGCACAAGAATAATTTGTGGAAGGCTACGAGGGGGTGTTGAATCTCGGATGATGTATGAGATTGAATCAAGAATTGATATAGAACTGCCAGAGTATCATGTTAATGACCCTGAACAAGAACCTGTTCTGGTTGATGCAATCCCCACTTTGAAGTTCAATCAAGAGGCTTTCAGTTCCATTGAAGATACACAGTGTGTAATATGTTTGGCAGATTACAAAGAAAGAGAAGTATTACGCATTATGCCCAAATGTGGCCACACTTTTCATCTTTCTTGCATTGATACATGGCTGAGAAAACAATCTACCTGTCCAGTATGCCGTCTTCCATTGAAAAACTCTTCTGAAACAAAACATGTGAGACCAGTGACATTTACCATGAGTCAGTATATTGATGATTCTCACACATCAGAAAGGAATGAAGATATTGAGAGGCATGTTGAACCTACTGTTAGTAACTCCTTACAACCAACTTCTGGAGAGCCAGAATCAAGGCAATAA 573 0.3997 MLGSGTNLVTTVIGFCMSATFIVFVCTRIICGRLRGGVESRMMYEIESRIDIELPEYHVNDPEQEPVLVDAIPTLKFNQEAFSSIEDTQCVICLADYKEREVLRIMPKCGHTFHLSCIDTWLRKQSTCPVCRLPLKNSSETKHVRPVTFTMSQYIDDSHTSERNEDIERHVEPTVSNSLQPTSGEPESRQ 190
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gabi3968g00007 190 MobiDBLite consensus disorder prediction 158 172 - -
Gabi3968g00007 190 MobiDBLite consensus disorder prediction 173 190 - -
Gabi3968g00007 190 MobiDBLite consensus disorder prediction 154 190 - -
Gabi3968g00007 190 SUPERFAMILY RING/U-box 80 139 - -
Gabi3968g00007 190 PANTHER OS11G0150450 PROTEIN 1 164 - -
Gabi3968g00007 190 SMART ring_2 90 131 IPR001841 -
Gabi3968g00007 190 CDD RING-H2_EL5-like 89 132 - -
Gabi3968g00007 190 ProSiteProfiles Zinc finger RING-type profile. 90 132 IPR001841 -
Gabi3968g00007 190 Pfam Ring finger domain 89 132 IPR001841 -
Gabi3968g00007 190 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 65 142 IPR013083 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gabi3968g00007 Gabi-Chr3968 105445 107285 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3968g00007 52 135 C3H Transcription Factor Family AT4G33565 38.095 1.47e-19 83.2
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3968g00007 - - ccaj:109802319 352.829