Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3967g00001 ATGGCAAATCATGATGCAACATCCTCAGATTTCAGCTATGATGTTTTTCTTAGTTTTAGATGCGGAAGCAGCAACGCATTGGTTGACCGTCTCGTTCGAGCTTTGCTTGATAAAGGAATCAACACCTTTAGGGATCAGGGAAAACTGAGGATAGGGGATGATGAAATTGAGAAGTCCAGAATGTCAATGGTTGTGCTCTGTGAAAACTATGCATCTTCCATCCGTTGCCTTGATGAACTAGCCAAGATCACTGAGTATATTGACAACAAGAGAAAACATGTTACGGCAATTTTTTACAAAGTGGAACCATCAGATATACGGAAACAAAGAAATTCTTATGAAGCAGCCATGACTGAACATGAAAAGACCTACGGAAAAGACTCGGAAAAGGTGAAAGCATGGAGGTCAGCTTTGACTAGAGTATGCGACATAAGCGGAAAACATTGCAAGGACGATTCGTTTGAATCTGAGCTTATTGAGAAGATTGTTAAAGACACATTGACTAAAGTAGCTCCAGCGCCTTTACAAATAAACCACGGAGTTGGACTTGATTCTCACTTTGAACAGGTGAAGTCACTCATAGATATTGGGTCTAATGATACCGTTCGCATGTTGGGAATTTATGGAGCTGGTGGAATTGGCAAAACCGCATTTGCCGTATGTATCTATAACAAGATCAGGCATGAATTTGGTGCTGCAAGTTTTCTTGTTAATGTCAGAGAAAAATCAGAAAAAAGCATTAAAGGCCTGGAGGATCTCCAAAAGGAACTTCTATCTCAGATGGGTGAGGAGACAGAAACCATGGTGGGCAGTGCATTTAAAGGAGGTATTGAACTCAAACGCAGGCTTGGCCATAGAAGAGTTCTTCTGGTTTTGGATGATGTCAATGCGATGAAACAATTGGAATCACTGGCTGGAGGATGTGATTGGTTTGGTTCTGGTAGCAGGATCATTATAACAACAAGGGATGAAGCTGTGCTAGATAATCATGATGTGGGAATTAAGAAATATAAAATGGAGGAGCTAAATGATCGTGACTCTCTTGAACTCTTTTGCTGGTATGCCTTTAATATGAGAAGGCCTGCTGAAAACTTTGTAGATATCTCTACTCGTGCAGTAAGTTATGCAAAGGGTATTCCATTGGCTTTAAGAGTAATAGGATCCAATTTGAAGGATGGGAGTGTAGAGGAATGGGAAATTGAATTGGGCAAATATAGGAAGGTTCCAGATGCTGAGATTCAAGGTATACTAGAAATAAGCTACTATGGTCTGTCTGAATTAGAGAAGAAAATATTCTTGGACATTGCTTGCTTCTTCAAAGGAGAGAGATGGGAATATGTTAAAAGGATACTAGAGGCTTGTGATTTCTTTCCAACTATTCGAGTATTTGTCAGTAAATGTCTCATAACTATTGATGAAAATGGCTGCTTGGATATGCATGATCTAATACAAGACATGGGTAGAGAGATTGTTAGGAAGGAGTCACCATCAAGCCCCGGTAACCGCAGCAGATTATGGTCTTATAAAGACGTTCTCCAAGTACTCGAAGGAAACTCAGGAAGTAGTACAATTGAAGGAATAATGCTTCATCCTCCTAGACATGAAGAAGTAGACCATTGGACTAATACTTCCTTCGAGAATATGAGGAACCTCAGAATTCTTATTGTTCGGAACACAACATTTTCAACAGGACCTAGTTATCTGTCAAATAGTTTACGGTTACTTGATTGGATGGGGTTCCCATCACAGTCTTTTCCAGCTGATTTTTATCCTCAAAGAATTGTTGACTTCAAGTTATCTCATAGTCCTTTGATATTGAAAAAGCCACTTCAGATATTTGAGGATTTGACATTCATCAATCTCTCCCAGTGTCAATACATAACTCAAATACCTGACTTGTCTGGAGCAAAAAATTTAAGAATATTGACACTTGACAGATGCCATAAATTGGATAAGTTTGATAAATCCATTGGATTTATGCCGAATCTTGTGTATTTAAGTGCATCAGAGTGCACCATGCTCAAAAGTTTTGTGCCAAGAATGTATTTGCCATCTCTCGAAGTGCTTTCATTTAATTTTTGCAAAAGACTTGAAGACTTCCCAGAAGTAATGCGAAAGATGGATAAGCCATTAAAGATTTGCATGATAAATACTGCTATTAAGGAATTTCCAAGGTCCATTTGTTACCTGACTGGGCTTGAGTATGTAGACTTGTCAAATTGCAAAGCACTCAAGGATCTATCAAGAGGCTTTTTATTGTTGCCAAAACTTGTCAAGTTAAAAATGGATGGAAGTTCTCAACTCGGAGAATCATTTAAAAGGTTCAAAGAGAGCCATTTAGTAGCAAATGGCTGCCCAAAATTAATGGCACTATATCTAAGCGAGGTTAATCTATCATGCGAAGATCTTTGCATAATTCTTCAAATATTTCCAAAATTGGAATACTTGGATGTATCGCATAATGATTTTGTATTCCTCCCAAAATGTATCACACAATCTTTGCCCTTGAAAAGTCTTGATGTGAGCTACTGCAGGAATCTTATGGAAATTCCAGAACTTCCCTTAAGTATTCAGAAAGTAGATGCGAGATACTGTCGATCCTTAACTTCAGAGGCATCAAGCATGCTATGGTCTAAGGTTTGTAAGGAGATCCAAAGAATACAAGTTGTGATGCCAAAAACAGAAGTTCCAGATTGGTTTGACTCTGTTGGCAATGAAGATATTCCACTTTTCTGGGCTCGCCGAAAGTTCCCTGTTGTTGCTTTAGCATTTGTGTTCGAGGAAGTCAAAGAGAATGTTAAGATAGAGATGAATAACTCAGAATTCCTGCCTGGAGTTGTATCAGCTGATCAGTCCCACACTGTTGGCCTCCACTTGTTTATTGACGGGCAAGAAATATGTAGCAGAGCTAACCATTATTTCACTGTTGGGGAAAATCATGTGTTATTGTGTGATCTACGAGTTTTGTTCAGTGAAGAAGAGTGGCAGGGCCTTGATGCAAATCTCGGATATGATTGGAAGGCCATTCAGGTTCAATATGAATCACGGTTGAATCTGAGACGCTGGGGAGTTCATGTGTACAAGCAAGAAACAATCACAGATGATATCAGATTCGATCCTCCCAATTCAACAGAGAACATGCCACCATCGCATTTGGTTCCAAAAACAAATTCACAACAGAGAATAAGACATGTACAAAGTTTGGATCTATTAGAAATATTTGGCCAGTACTTGAATTTTTTAAAATTAGATCAAATTGCCTCTGTTACAAATGTAATATTGAGATCGTGGAGGAATGCAAAGGCTGATGATGTTAAAGAGGATGCTTCAGCCTCTGCCTATGGGGCAAGCTTAAAGCAAGAACAAGAAGAATTTGTGTGGGATGTGGCACAGGTTTTAGACATGTTGATGGAGAATGTACAGAAACAAGAAATTCAAAATTTAGGCCGATTGGTGGTAGAATTATTGACAGCACGGGCACAACTTATGAAGACAAAAGGCCATGAGATGTTGCACATCAATATAAACATGCCTATTATTCTAGATGAATGTGAATGTCACACTTCTAAAAATTTAGCTGAAGCTCCAAGCCGTCGCTATTGGGGAAGCTTCGAGCTAGAAGAAGGAGATCCACTTGTGTGGAGATTTTGGAAAAGCAACGAAGCCTTCGGGGAAAGGGTAAACACTGTTCTATTGAAATGCCAGCGTTCCTACGGGGAATCCTTGGAGGAAGAATATAACGATCCTGCATTGCAAGCATTAATGAGGAAGATAGAGCAAGACGCTATGAGATTGAATAAATCTTGGGGGAAAATGAAGGCATCAATTGTTTCAAAGAATGTCCCAGTTTCTGACAAATATATGATGGAAACAGCAATCATCATAGGACAAGAAAGACTGGGAAGGTTGGGATCTAATTTCAATAAGGCACCTTACGGGAAGTTAAGGGTGGAGCATGATGCGCAGAGCACTAATCAGAATCAGAAGCCGCATGAGTTAAGAGTGGAGCACAATGCTGAAAGCAATACTGGGAATCAGAATCAGAATCAAAAGCAGACCAGGTTTGGTTGGACCAAGATTTTTAATCGTAGAGCAGAAAAAAATGGGAAATCAGGAGACAAGGCATGA 4128 0.3939 MANHDATSSDFSYDVFLSFRCGSSNALVDRLVRALLDKGINTFRDQGKLRIGDDEIEKSRMSMVVLCENYASSIRCLDELAKITEYIDNKRKHVTAIFYKVEPSDIRKQRNSYEAAMTEHEKTYGKDSEKVKAWRSALTRVCDISGKHCKDDSFESELIEKIVKDTLTKVAPAPLQINHGVGLDSHFEQVKSLIDIGSNDTVRMLGIYGAGGIGKTAFAVCIYNKIRHEFGAASFLVNVREKSEKSIKGLEDLQKELLSQMGEETETMVGSAFKGGIELKRRLGHRRVLLVLDDVNAMKQLESLAGGCDWFGSGSRIIITTRDEAVLDNHDVGIKKYKMEELNDRDSLELFCWYAFNMRRPAENFVDISTRAVSYAKGIPLALRVIGSNLKDGSVEEWEIELGKYRKVPDAEIQGILEISYYGLSELEKKIFLDIACFFKGERWEYVKRILEACDFFPTIRVFVSKCLITIDENGCLDMHDLIQDMGREIVRKESPSSPGNRSRLWSYKDVLQVLEGNSGSSTIEGIMLHPPRHEEVDHWTNTSFENMRNLRILIVRNTTFSTGPSYLSNSLRLLDWMGFPSQSFPADFYPQRIVDFKLSHSPLILKKPLQIFEDLTFINLSQCQYITQIPDLSGAKNLRILTLDRCHKLDKFDKSIGFMPNLVYLSASECTMLKSFVPRMYLPSLEVLSFNFCKRLEDFPEVMRKMDKPLKICMINTAIKEFPRSICYLTGLEYVDLSNCKALKDLSRGFLLLPKLVKLKMDGSSQLGESFKRFKESHLVANGCPKLMALYLSEVNLSCEDLCIILQIFPKLEYLDVSHNDFVFLPKCITQSLPLKSLDVSYCRNLMEIPELPLSIQKVDARYCRSLTSEASSMLWSKVCKEIQRIQVVMPKTEVPDWFDSVGNEDIPLFWARRKFPVVALAFVFEEVKENVKIEMNNSEFLPGVVSADQSHTVGLHLFIDGQEICSRANHYFTVGENHVLLCDLRVLFSEEEWQGLDANLGYDWKAIQVQYESRLNLRRWGVHVYKQETITDDIRFDPPNSTENMPPSHLVPKTNSQQRIRHVQSLDLLEIFGQYLNFLKLDQIASVTNVILRSWRNAKADDVKEDASASAYGASLKQEQEEFVWDVAQVLDMLMENVQKQEIQNLGRLVVELLTARAQLMKTKGHEMLHININMPIILDECECHTSKNLAEAPSRRYWGSFELEEGDPLVWRFWKSNEAFGERVNTVLLKCQRSYGESLEEEYNDPALQALMRKIEQDAMRLNKSWGKMKASIVSKNVPVSDKYMMETAIIIGQERLGRLGSNFNKAPYGKLRVEHDAQSTNQNQKPHELRVEHNAESNTGNQNQNQKQTRFGWTKIFNRRAEKNGKSGDKA 1375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3967g00001 1375 MobiDBLite consensus disorder prediction 1339 1357 - -
Gabi3967g00001 1375 Gene3D - 169 336 IPR027417 -
Gabi3967g00001 1375 Gene3D Ribonuclease Inhibitor 714 895 IPR032675 -
Gabi3967g00001 1375 Gene3D Ribonuclease Inhibitor 535 713 IPR032675 -
Gabi3967g00001 1375 ProSiteProfiles TIR domain profile. 11 170 IPR000157 GO:0007165
Gabi3967g00001 1375 SMART till_3 12 144 IPR000157 GO:0007165
Gabi3967g00001 1375 SUPERFAMILY L domain-like 492 874 - -
Gabi3967g00001 1375 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 748 IPR044974 GO:0006952
Gabi3967g00001 1375 MobiDBLite consensus disorder prediction 1339 1375 - -
Gabi3967g00001 1375 Pfam NB-ARC domain 187 399 IPR002182 GO:0043531
Gabi3967g00001 1375 Gene3D - 341 425 IPR042197 -
Gabi3967g00001 1375 MobiDBLite consensus disorder prediction 1037 1056 - -
Gabi3967g00001 1375 MobiDBLite consensus disorder prediction 1360 1375 - -
Gabi3967g00001 1375 Coils Coil 240 260 - -
Gabi3967g00001 1375 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 146 IPR035897 -
Gabi3967g00001 1375 PRINTS Disease resistance protein signature 204 219 - -
Gabi3967g00001 1375 PRINTS Disease resistance protein signature 376 390 - -
Gabi3967g00001 1375 PRINTS Disease resistance protein signature 282 296 - -
Gabi3967g00001 1375 PRINTS Disease resistance protein signature 728 744 - -
Gabi3967g00001 1375 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 435 IPR027417 -
Gabi3967g00001 1375 Pfam TIR domain 13 176 IPR000157 GO:0007165
Gabi3967g00001 1375 Gene3D - 6 168 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3967g00001 Gabi-Chr3967 17145 22422 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3967g00001 8 778 WRKY Transcription Factor Family AT4G12020 32.282 1.82e-82 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3967g00001 - - tpra:123920929 1721.83