Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3962g00002 ATGGGTATTTGGGATTGCAAATTCTTTATTAGGGTTTCATCTATTTTCTGGTTGATGTGGGTTTCATCAGGAGATGTTCCTGATGACCACATTCACATTCTGATAGACTGTGGATCCACCAACAATACTCAGGTGGGGGCTCGCTTATTTCAAGCTGATAATTCTTCTTCCTACTTGCTTTCAACCTCAGAGTTTATTTTGGCAAAGGCACACTTCACCCGTATTCCATCATCTTTTGATTCAGAACTGTACCAGACTGCTCGAATCCTTAAGAGTGTTTCTCAATACACATTCCGAATCAAAAGACATGGAAGGCACTGGATTCGCTTGCATTTCCTCCCTTTCAGTTTCGGAAATTACAATATGAGCACTGCGAAATTCTCTGTTTCTGCTCAAAGCATCACACTGCTCAAAGATTTCCAAATAGACACAGGTTCTTTAATGAAAGAATACTCTTTGAACATTACAGATAGCCAGCTCGTGCTCACTTTTACCCCGTCTTTAAGTTCATTTGCTTTTATAAATGCCATAGAAGTTTTATCTATCCCTGACAAGGTTATTCCTGAGCATGTTAGCATCGTGAATCCACATGGGGATGACAAGGACCTGTGGAAGAAGGCATTGGAGACTGTTGCTAGGGTGAATATGGGTAATCAAACAGTATCTCCCCTTAATGATTCTTTGTGGCGTCTTTGGGTCTCAGATGATAGATATCTTATACACAATAATCTTGTGGATTTTGTATCCAAAATTGCAGCAGTTAATTTCACGGAAACAAACATTACTGAAGATATTGCCCCACCTACGGTATACGGGACTGTGACTAGATTGAGAACAGGTTCAGATCCTAGAACTATTGCAAATGTGACATGGCTTTTTGATGTTGATCCGGGCTTTGATTATCTGGTTCGCTTTCACTACTGTGACATTGTGAATCTACCCCCAAACACTCTCTTCAACGTTTACGTTAACTCTTGGCTTGTTTCTACAGTCGATCTTGGCAAAGAAACATCAAATAATATTTTTGTGCCATATTATATGGATTCCATCACAAGGACTAGTGGCAGCCGTAATTTAAATGTTAGTGTTGGTACTTTTAGCATAAGTGAAGCATCTTCCCCTGAGGCCATTCTCAATGGGCTAGAGATCATGAAGTTGAGTAACTCTAAAGATAGCCTGGTCTTAGATTCAGAGAGAAATACCAAGACAAAAGTTGGTATTGTAGTGGGTTTAGTGACTGGGTCTGTGGTTGGTTTATTGGCTATAGTTATGGCTTTACTTCTGCTTTGCAGAAGAAGAAGAAGAAAGAGTCTCCACATTGCTCAAGAAAAGGGTGACCATTTTGCTATTAGCGAAGAGGCTAGTAACAATTATGATGGAAATGCAATTTTTTCAAGCTCAAAAATTGGGTATCGGTTACCTCTTGCAGTAATTCAACAAGCAACTAATAATTTCAGTGAAGATTTGGTCATTGGTGCTGGTGGTTTTGGGAAGGTTTACAAGGGAGTTTTAAAAGGTGAAACGAAGGTAGCTGTGAAAAGGGGATCATGCCAATCACAACAAGGTCTTGCTGAGTTTCGGACTGAAATTGAGATGCTATCGCAGTTTCGTCATCGCCATTTAGTATCATTGATTGGGTACTGTAATGAAGAAAATGAGAGGATCATTATTTACGAGTACATGGAAAAAGGGAGTCTGAAGAACCATATGTTCGGATCAGATGTATATGCACCATGCTTAAGTTGGAGGCAGAGGCTTGAGATTTGCATCGGAGCAGCCAGAGGATTACATTATCTTCACACGGGCTCTGCCAAGGCAATTATTCACCGTGATGTCAAATCGGCAAATATCCTGCTAGATGATAATTTCATGGCCAAAGTTGCTGATTTTGGTCTTTCAAAAACTGGTCCAGAGATTGACAAGACTCATGTCAGTACAGCAGTGAAAGGAAGCTTTGGCTATCTTGATCCAGAATACTTAATAATGCAGCAGCTGACAGAAAAATCAGATATTTACTCTTTTGGGGTGGTCATGTTTGAAGTCCTTTGTGGGAGGCCAGTAATTGATCCATCACTCCCACGAGAAAAGGTGAATCTAGTGGAATGGATAATGAAATGTAAGGAAAGAAGCACAATAGAGGAAATTGTAGATCCTCGCCTTGCAGTTGCAGGTCAGATAAAGTCAGAGTCACTCCAGATATTTGTAGAGATTGCCAAAAAGTGCTTGGTAGAACATGGCATCAATCGGCCTAACATGGGAGATGTGTTGTGGCACTTGGAGTATGCTCTGCGACTAGAAGGTGTTGATGAGAGATTCAACCATGTTGGTGATGTGTCCTCCCAAATGTATCGCTCAGAAACTGGATTATCTTCCATGGAATACAGTATGGGAAGCGTAGGTAACCTATCTGGTGTTTCATTCAGCAAGGTGTTTGCCCAAATGGTGGCGGAAGATATGCTGTAG 2463 0.408 MGIWDCKFFIRVSSIFWLMWVSSGDVPDDHIHILIDCGSTNNTQVGARLFQADNSSSYLLSTSEFILAKAHFTRIPSSFDSELYQTARILKSVSQYTFRIKRHGRHWIRLHFLPFSFGNYNMSTAKFSVSAQSITLLKDFQIDTGSLMKEYSLNITDSQLVLTFTPSLSSFAFINAIEVLSIPDKVIPEHVSIVNPHGDDKDLWKKALETVARVNMGNQTVSPLNDSLWRLWVSDDRYLIHNNLVDFVSKIAAVNFTETNITEDIAPPTVYGTVTRLRTGSDPRTIANVTWLFDVDPGFDYLVRFHYCDIVNLPPNTLFNVYVNSWLVSTVDLGKETSNNIFVPYYMDSITRTSGSRNLNVSVGTFSISEASSPEAILNGLEIMKLSNSKDSLVLDSERNTKTKVGIVVGLVTGSVVGLLAIVMALLLLCRRRRRKSLHIAQEKGDHFAISEEASNNYDGNAIFSSSKIGYRLPLAVIQQATNNFSEDLVIGAGGFGKVYKGVLKGETKVAVKRGSCQSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCNEENERIIIYEYMEKGSLKNHMFGSDVYAPCLSWRQRLEICIGAARGLHYLHTGSAKAIIHRDVKSANILLDDNFMAKVADFGLSKTGPEIDKTHVSTAVKGSFGYLDPEYLIMQQLTEKSDIYSFGVVMFEVLCGRPVIDPSLPREKVNLVEWIMKCKERSTIEEIVDPRLAVAGQIKSESLQIFVEIAKKCLVEHGINRPNMGDVLWHLEYALRLEGVDERFNHVGDVSSQMYRSETGLSSMEYSMGSVGNLSGVSFSKVFAQMVAEDML 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3962g00002 820 Gene3D - 206 388 - -
Gabi3962g00002 820 Gene3D - 28 182 - -
Gabi3962g00002 820 FunFam Receptor-like protein kinase FERONIA 561 781 - -
Gabi3962g00002 820 SMART serkin_6 485 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3962g00002 820 CDD STKc_IRAK 491 760 - -
Gabi3962g00002 820 Pfam Malectin-like domain 35 385 IPR024788 -
Gabi3962g00002 820 ProSiteProfiles Protein kinase domain profile. 485 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3962g00002 820 PANTHER OS07G0166700 PROTEIN 472 766 IPR045272 GO:0004714|GO:0006468
Gabi3962g00002 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 607 619 IPR008271 GO:0004672|GO:0006468
Gabi3962g00002 820 FunFam receptor-like protein kinase FERONIA 449 560 - -
Gabi3962g00002 820 Gene3D Transferase(Phosphotransferase) domain 1 561 776 - -
Gabi3962g00002 820 Pfam Protein tyrosine and serine/threonine kinase 490 686 IPR001245 GO:0004672|GO:0006468
Gabi3962g00002 820 FunFam Receptor-like protein kinase FERONIA 207 388 - -
Gabi3962g00002 820 SUPERFAMILY Protein kinase-like (PK-like) 460 761 IPR011009 -
Gabi3962g00002 820 Gene3D Phosphorylase Kinase; domain 1 447 560 - -
Gabi3962g00002 820 ProSitePatterns Protein kinases ATP-binding region signature. 491 513 IPR017441 GO:0005524
Gabi3962g00002 820 FunFam Putative receptor-like protein kinase 32 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3962g00002 Gabi-Chr3962 50248 52710 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3962g00002 1 818 Receptor kinase-like Gene Family AT3G46290 50.535 0.0 801
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gabi3962g00002 Malectin_like 9.5e-29 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3962g00002 - - lang:109328391 1184.47