Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3957g00074 ATGAGTGAACCATTGAGGCTACTAAAAGTCATTGTTGTGCAAGGGAAAAGACTAGTGATCCGGGATTTCAAGAGCAGTGATCCTTATGTTGTGGTCAAGCTGGGGAATCAGACATCAAAGACCAGGGTCATTAATTGCTGCTTGAATCCTGTTTGGAATGAAGAGCTGACTTTCACTATGACAGAACCTTTGGGAGTTCTGAATTTGGAAGTATTTGATAAAGATTTTTTGAAGGCTGATGACAAGATGGGAAATGCTTACTTGAACCTTCAACCATTAGTCTCTGCAGCCAGATTAAGAGATATTTTAGGGGTCTCCTCTGTTGATACAACATTGAGGAAGGTCATACCGGATAGTGAAAACTGTCTTGTGTGTGAAAGCAGTATCATTTGTGTTAATGGTGAGGTGGTGCAGAATGTTTGGTTAAGGCTTCGCGGAGTTGAGTCTGGGGATCTAGAATTGACGATCAAGTTGATCACTCCTGCTGCTTCCTCATTATAG 501 0.4172 MSEPLRLLKVIVVQGKRLVIRDFKSSDPYVVVKLGNQTSKTRVINCCLNPVWNEELTFTMTEPLGVLNLEVFDKDFLKADDKMGNAYLNLQPLVSAARLRDILGVSSVDTTLRKVIPDSENCLVCESSIICVNGEVVQNVWLRLRGVESGDLELTIKLITPAASSL 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3957g00074 166 Gene3D C2 domain 2 164 IPR035892 -
Gabi3957g00074 166 Pfam C2 domain 8 98 IPR000008 -
Gabi3957g00074 166 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 159 IPR035892 -
Gabi3957g00074 166 CDD C2_ArfGAP 7 150 - -
Gabi3957g00074 166 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 5 160 IPR044562 -
Gabi3957g00074 166 PRINTS C2 domain signature 46 59 IPR000008 -
Gabi3957g00074 166 PRINTS C2 domain signature 22 34 IPR000008 -
Gabi3957g00074 166 PRINTS C2 domain signature 67 75 IPR000008 -
Gabi3957g00074 166 SMART C2_3c 7 102 IPR000008 -
Gabi3957g00074 166 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3957g00074 Gabi-Chr3957 650822 651701 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3957g00074 1 159 C2H2 Transcription Factor Family AT4G05330 41.975 2.70e-34 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3957g00074 - - gmx:100798217 280.411