Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3957g00064 ATGGCTGAATCTGACAACGAGTCAGGGGGTCAACCCGGTAACACAAGTGGAAACAATGAATTCTCAGGGTGCAGAGAGCAGGATAGGTTACTTCCCATAGCAAACGTGAGCAGGATCATGAAGAAAGCCTTACCAGCGAACGCTAAGATATCAAAGGAAGCGAAAGAGACTATGCAAGAGTGTGTATCAGAGTTCATCAGTTTCATAACTGGGGAGGCATCAGATAAGTGCCAGAAAGAGAAGAGGAAGACAATCAACGGCGATGATCTTCTGTGGGCCATGACAACACTGGGATTTGAAGAGTATGTGGAGCCACTCAAAACTTATCTCAACAAATATAGGGAGATGGAGGGGGAGAAGACTGCTATGATTGGGAGGCACCACAGTGATCATGGTGGTGAGGCTGAGGCTGATGGTGATGGTGGGGTTCCATCCACTATGATGATGATGATGGGTCATCACCACATGTATGGATCTACTAATGTCTGGAAGAATTAG 498 0.4659 MAESDNESGGQPGNTSGNNEFSGCREQDRLLPIANVSRIMKKALPANAKISKEAKETMQECVSEFISFITGEASDKCQKEKRKTINGDDLLWAMTTLGFEEYVEPLKTYLNKYREMEGEKTAMIGRHHSDHGGEAEADGDGGVPSTMMMMMGHHHMYGSTNVWKN 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3957g00064 165 PRINTS CCAAT-binding transcription factor subunit A signature 77 95 - -
Gabi3957g00064 165 PRINTS CCAAT-binding transcription factor subunit A signature 58 76 - -
Gabi3957g00064 165 PRINTS CCAAT-binding transcription factor subunit A signature 96 114 - -
Gabi3957g00064 165 ProSitePatterns NF-YB/HAP3 subunit signature. 61 77 IPR003956 GO:0005634|GO:0006355|GO:0043565
Gabi3957g00064 165 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 6 129 IPR027113 GO:0001228|GO:0006355|GO:0016602
Gabi3957g00064 165 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 30 94 IPR003958 -
Gabi3957g00064 165 FunFam Nuclear transcription factor Y subunit B-3 19 141 - -
Gabi3957g00064 165 MobiDBLite consensus disorder prediction 1 23 - -
Gabi3957g00064 165 Gene3D Histone, subunit A 19 140 IPR009072 GO:0046982
Gabi3957g00064 165 SUPERFAMILY Histone-fold 27 136 IPR009072 GO:0046982
Gabi3957g00064 165 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3957g00064 Gabi-Chr3957 587283 588239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3957g00064 1 127 CCAAT-HAP3 Transcription Factor Family AT4G14540 79.070 3.91e-69 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Gabi3957g00064 CBFD_NFYB_HMF 7.6e-28 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3957g00064 K08065 - gmx:100778034 247.284