Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3957g00044 ATGGAAGTCCAATCTTCCTTCCTAGTTATTATTACCTTCCTCCTCTCACTCTTAATGCTTTGGCTTGCAAAGAACTTCAAGGCAAAGAGTCTGCATAAACTTCCACCAGGGCCATGGAAGTTACCTCTCGTAGGGAACCTGCATCAGCTAGCAGCAGCAAGCTCACTTCCTCACCGTGCTCTCCATGAACTAGCCCAAAAATATGGACCGCTGATGCACCTACAACTAGGTGAGATTTCTGCAGTGATTGTATCATCCCCAAACATGGCCAAGGAAATAATGAAAACACATGATCTTGCCTTTGCTCAGAGGCCAGCATTTCTTAATGCTGATATTTTAGCCTATGGATCACAAGATATAGCATTTGCTCCATACGGTGATTATTGGAGACAAATGAGAAAAATATGTACGTTGGAGCTTCTAAGTGCTAAGAGGGTTCAGTCATTCTCCAATATTAGAGAAGATGAGGTAGCTAAACTCATAGAAACAATTCAGTCATCTGCAGGTGCGCCAGTCAATCTCACTAGCATGATTAACTCTTTCGTAAGTACCTTTGTTTCTAGAACAGCTTTTGGTAACATATCTGAAGACCATGAAGAATTTTTATTGATGGTAAAGGAAGCAATAGAATTGGCAGATGGCTTTGATCTTGCTGATCTGTTTCCTTCTTTGAAACCATTGCATCTAATAACTGGGATGAAAGCCAAATTGGAGAAGATTCATAAGAAGCTCGACAACATCTTGGAAAAGATTGTAAAGGAAAATCAAGTAAAGCAAATGAGAGCAAACAAAGGCACGGGAGAAGAAAAGAACGAAAATCTTGTTGAGGTTCTTTTAAGAGTCATGCAGAGTGGAAGCCTTGAGACCCCAATTACAATCAACAATATCAAAGCTGTGATTTGGGATATATTTGCTGCTGGAACGGATACTTCAACAACAGTACTGGGGTGGACTATGTCAGAAATGATGAGAAACACAAGAGTAAGAGAGAGGGCACAAGCTGAGATTAGACAAACTTTGAGAGGAAAAGAAACAATCCATGAGACAGACATAGGGGAACTTAGTTACTTAAAGGCAGTAATAAGAGAAACCTTGAGGTTACACCCACCTCTTCCTTTGTTGCTTCCAAGAGAATGCAGGGAAGCATGCAGGATCGGTGGATATGAATTACCCACTAAGACTAAAGTGATGGTAAACGCGTGGGCACTTGGAAGAGATCCTGAGTACTGGTATGATGCTGAGAGCTTTAAACCAGAAAGGTTTAGTGATAATTGTATTGATTTCAAAGGGACAAACTTCGAGTATATCCCTTTTGGGGCAGGAAGAAGAATATGTCCTGGCATTTCATTCGGATTAGCCAATGTTGAGTTTGCTCTAGCCAAATTACTCTACCACTTCAACTGGGAACTCCCGCAAGGAATGAAACCAGAGGACTTGGATATGGATGAAGGATTTGGAGCTGTGGTTGGAAGGAAAAACAACCTTTACTTGATTCCCACACCTTACAATCCTTCAATTCTTGATAATGCCAAATGA 1536 0.4102 MEVQSSFLVIITFLLSLLMLWLAKNFKAKSLHKLPPGPWKLPLVGNLHQLAAASSLPHRALHELAQKYGPLMHLQLGEISAVIVSSPNMAKEIMKTHDLAFAQRPAFLNADILAYGSQDIAFAPYGDYWRQMRKICTLELLSAKRVQSFSNIREDEVAKLIETIQSSAGAPVNLTSMINSFVSTFVSRTAFGNISEDHEEFLLMVKEAIELADGFDLADLFPSLKPLHLITGMKAKLEKIHKKLDNILEKIVKENQVKQMRANKGTGEEKNENLVEVLLRVMQSGSLETPITINNIKAVIWDIFAAGTDTSTTVLGWTMSEMMRNTRVRERAQAEIRQTLRGKETIHETDIGELSYLKAVIRETLRLHPPLPLLLPRECREACRIGGYELPTKTKVMVNAWALGRDPEYWYDAESFKPERFSDNCIDFKGTNFEYIPFGAGRRICPGISFGLANVEFALAKLLYHFNWELPQGMKPEDLDMDEGFGAVVGRKNNLYLIPTPYNPSILDNAK 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3957g00044 511 PANTHER OS08G0105600 PROTEIN 60 504 - -
Gabi3957g00044 511 CDD CYP71-like 67 495 - -
Gabi3957g00044 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Gabi3957g00044 511 Coils Coil 230 254 - -
Gabi3957g00044 511 FunFam Cytochrome P450 71D8 27 499 - -
Gabi3957g00044 511 Pfam Cytochrome P450 35 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3957g00044 511 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3957g00044 511 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3957g00044 511 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3957g00044 511 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3957g00044 511 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3957g00044 511 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3957g00044 511 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3957g00044 511 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3957g00044 511 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3957g00044 511 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3957g00044 511 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3957g00044 511 Gene3D Cytochrome P450 27 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3957g00044 511 SUPERFAMILY Cytochrome P450 35 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3957g00044 Gabi-Chr3957 421634 423345 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3957g00044 7 502 Cytochrome P450 AT3G26300 42.376 5.42e-142 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3957g00044 - K15472 gmx:100800554 806.594