Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3957g00036 ATGCAAATGTCTCAGAAACACCCAAGTTCAGCTGGTATCCACTTCTATCACCAGCCTATGCAAGGCGTTTACCAAATATTACAAAACAATCTATGCCGTGATATCCATGATAGCAGCAGCAGCCAGGGCACTACTGTTTCTTTTGAAACCTGCAAGGAGCAATACTTTACCCTGGAATCATCCCCAGTAACCGCTGGTTTCATGGCTTGTGATTCCCCTTCCTATGCCAGCACATCATCAAATAGGAGTCCATTTTCTCCACAAGTTTCTCAGTCATGCTATTCAGATCACCACCAGTCATCTGACAACACCTATGGATCACCAGTAAGCGGGTTGTCTAGTGTTGATGATGGGGACGAATTAAAGAACATATTTAGAGAACTGGAGATTTCATTGTTGGGGTCTGAGGAATCAGATATTGTTGACAGTTATGACTGCTGCGTCAAGGGTGGCCTCCACAGAGCATCTCCTTTAGCTAAGCCTAAATATAATTGGGATCAGATTGCAGAAATGATTCCAAAGTTTGACTTGAAAGAAGTCCTCATGCTATGTGCACAGGCTGTGTCCGATGAGGACATTACGACAGCAAGAGGCTGGATGGATAATGTGTTGGGGAAGATGGTATCAGTTGCTGGAGATCCATACCAGAGGTTAGGTGCTTACTTGTTGGAGGGGCTTAGAGCAAGGTTGGAATCATCAGGGAGTCTGATCTACAAAACCTTGAAGTGTGAACAACCAACAAGCAAAGAACTAATGACTTACATGCACGTTTTGTATCAGATTTGCCCATATTGGCAGTTTGCATACGTAACTGCAAATGTTGTCATTGGAGAAGCAATGGCAAATGAATCCAGGATTCATATAATTGATTTCCAAATTGCGCAGGGCACACAGTGGCATTTACTTATCCAGGCTCTTGCACATAGGCCTGGTGGACCCCCTTTCATTCGCATAACTGGTGTTGATGATTCCCAATCATCTCATGCTCGGGGTGGAGGACTTCAGATTGTAGGAGACCGGCTTTCAGATTTTGCCAGATCTTGCGGGGTTCCATTTGAGTTCCACAGTGCTGCCATGTCAAGCTGTGAGGTTGAACGAGAAAATCTTGTAATTCGACCCGGGGAAGCTCTTGCTGTAAATTTTCCTTATGTTTTGCACCACATGCCAGATGAGAGTGTGAGCACAGGGAACCATAGAGACAGATTGTTGAGATTGGTTAAGAGCTTGTCTCCCAAGGTTGTGACCCTGGTTGAGCAAGAATCCAACACCAACACTTCTTCTTTCTTTCACAGGTTTGCTGAGACCCTCGATTATTATACTGCTATGTTCGAATCAATAGATGTGGCTCGCCCCAGAGATGATAAGAAGAGGATTAGTGCTGAGCAACACTGTGTGGCACGGGACATTGTCAACATGATAGCTTGCGAGGGGGTTGAGAGGGTGGAAAGGCATGAACTTTTAGGAAAGTGGAGATTGAGATTTTCTATGGCTGGATTTCAACAATGCCCATTGAGTTCTTCAGCGATGGATGCTGCCCGAAATCTGTTGATTGAATTCGATGAAAATTATAGGCTTGAACAGAGAGATGGTGCTCTATATCTTGGCTGGATGAAGAGAGCTTTGGTCACCTCTTCTGCTTGGAGGTGA 1647 0.4481 MQMSQKHPSSAGIHFYHQPMQGVYQILQNNLCRDIHDSSSSQGTTVSFETCKEQYFTLESSPVTAGFMACDSPSYASTSSNRSPFSPQVSQSCYSDHHQSSDNTYGSPVSGLSSVDDGDELKNIFRELEISLLGSEESDIVDSYDCCVKGGLHRASPLAKPKYNWDQIAEMIPKFDLKEVLMLCAQAVSDEDITTARGWMDNVLGKMVSVAGDPYQRLGAYLLEGLRARLESSGSLIYKTLKCEQPTSKELMTYMHVLYQICPYWQFAYVTANVVIGEAMANESRIHIIDFQIAQGTQWHLLIQALAHRPGGPPFIRITGVDDSQSSHARGGGLQIVGDRLSDFARSCGVPFEFHSAAMSSCEVERENLVIRPGEALAVNFPYVLHHMPDESVSTGNHRDRLLRLVKSLSPKVVTLVEQESNTNTSSFFHRFAETLDYYTAMFESIDVARPRDDKKRISAEQHCVARDIVNMIACEGVERVERHELLGKWRLRFSMAGFQQCPLSSSAMDAARNLLIEFDENYRLEQRDGALYLGWMKRALVTSSAWR 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3957g00036 548 ProSiteProfiles GRAS family profile. 168 548 IPR005202 -
Gabi3957g00036 548 MobiDBLite consensus disorder prediction 78 111 - -
Gabi3957g00036 548 MobiDBLite consensus disorder prediction 78 114 - -
Gabi3957g00036 548 Pfam GRAS domain family 177 548 IPR005202 -
Gabi3957g00036 548 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 107 542 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3957g00036 Gabi-Chr3957 375680 379477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3957g00036 1 548 GRAS Transcription Factor Family AT4G17230 59.710 0.0 647
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi3957g00036 GRAS 7.7e-128 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3957g00036 - - gmx:100776109 888.641