Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3957g00003 ATGAAAGTCTCAAAGCAACAGAAGAAGCAGCAGCATCAGCTTCAACAGAGAGGATGCAGGGCCTTGTGTTGCAGTTGCAGGTTTAGTGTTTCTTCCTCAGAGGAAGCAGAAAGCTCTGCCTCTGATAGGTTCCCTTCTGTATCTAGCCTGGCACATGCCATGGTGCAAGAGAGACTTGACCAAATGATTAGAGAAAGGGTTGAAGCTAGACATGTAGAGAGAAGAAGGCATCAGAGCAGAGAAGGAACCAAGTTCGTTGTGATGGTAGCAATGGAGAAATGCTCTTACGATCCAAGAGAGGACTTTAGAGAGTCCATGATGGAGATGATAACTGCAAACCGCCTTCAAGATGCGAAAGATCTTCGTAGTCTATTGAACTATTATATCTCTATGAACTCCAAAGAGTACCATACTCTTATCTTTCAGGTTTTTCATGATGTTTGTACTAATTTGTTCTTATCATGTAAAAGCCATTGGTAA 480 0.4229 MKVSKQQKKQQHQLQQRGCRALCCSCRFSVSSSEEAESSASDRFPSVSSLAHAMVQERLDQMIRERVEARHVERRRHQSREGTKFVVMVAMEKCSYDPREDFRESMMEMITANRLQDAKDLRSLLNYYISMNSKEYHTLIFQVFHDVCTNLFLSCKSHW 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3957g00003 159 Pfam Transcriptional repressor, ovate 95 152 IPR006458 -
Gabi3957g00003 159 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 9 152 IPR038933 GO:0045892
Gabi3957g00003 159 NCBIfam uncharacterized plant-specific domain TIGR01568 89 152 IPR006458 -
Gabi3957g00003 159 ProSiteProfiles OVATE domain profile. 91 150 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3957g00003 Gabi-Chr3957 56720 57199 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gabi3957g00003 Ovate 4.7e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3957g00003 - - gmx:102663136 251.906