Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3950g00002 ATGAGACTCACATTCTTTGCTATGTTCATTTTCTTTGCTCTTTTCATCTCCTTAGGGTTTCTCTTTCTCTCCTTTCTCTCCTCACTCAACAACACTAATAAACCCAAACATTCACCCTTGTCCTCAACCCATTCCCCTCCTTCATACCCAATCATTGGTTGCCTCATCTCTTTCTACCAAAACCGCCACCGTCTTCTTGACTGGTACACCCAACACTTGTCCCAATCCCCGACCCAAACCATCGTGGTGCGCCGCCTCGGCTCACGGCACACCATCGTCACCGCGAATCCTATTAACATTGAGTACATCCTGAAGACCAATTTCAAAAACTTCCCCAAAGGAAAACCCTTCACTGAAATCCTGGGTGACCTTCTTGGTTGTGGCATATTCAACGTGGACGGCGAGTTATGGTCCACACAGCGCAAATTAGCGAGCCACGAGTTCAGCACAAGGTCCCTCAAAGAGTTCATCGTTAAAACCCTCGAAGAAGAAGTCCAACAGAGGCTAATTCCATTGCTAGAAAGTGCTTCCAATAACAACAACGTTTTGGACTTGCAAGATATATTAAGAAGACTCACATTTGATACTATTTGTAAAGTCTCATTAGGCAATGATCCTTGTTGCTTAGACCTATCTAAACCCTTGCCACCACTTTTAACCGCATTTGACACGGCTTCTGAGATAAGCGCCATGCGTGCAACCGCACCATTGTTTCTCATGTGGAAGATCAAAAGAGCATTGAATTTAGGCTCCGAGAAATCACTCAAAGAAGCCGTTAAACTCGTTCACGAGTCGGTTCACAAGATGATTGCTATCAAGAAGAAAGAAATCAGGAGTGTTAGGAAGGGTGATGCTGGCAATGATTTGTTGACAAAGTTGTTGGAGATGGGGCATGATGAAATCATGGTGAGGGATATGGTTATAAGCATGATAATGGCGGGGAGAGACACGACATCGGCGGCGATGACGTGGCTCTTTTGGTTGCTATCGGAACAACCAAGCAAAGCGGAATTGATAGTGAAGGAAGTGAAGGAAGTTTTTGGAGGAAAAAATAATGGAGGAGAAGTAGATGAGTTGATGAGACCTTTTGATTATGAGGGTTTGAAAGAAATGAAGTTTTTGAAAGCTTGTTTGTGTGAATCTATGAGGTTGTATCCACCAGTGGCATGGGATTCAAAGCATGCTGCTAGTGAGGATGTGTTGCCTGATGGCACTTTGGTAAATAAAGGAGATAGGGTGACTTATTTTCCTTATGGGATGGGGAGGATGGAGATGTTGTGGGGGAAGGATTTTGATGAATTTAAACCGGACAGGTGGTTTAATGAACCGGGTGAAGATCACATTAATGGGGTTTTGAAATCAGTGAACCCTTACAAATTTCCTGTTTTTCAGGCCGGTCCAAGAGTTTGCCTTGGGAAGGAGATGGCTTTCATTCAGATGGAGTATGTGGTTGCTTCTATTCTGAACCGGTTTGAGATTCGGCCTGTTTCGGTGGACCAACCGGTTTTTGTTCCTCTTCTAACGGCTCATATGGCTGGTGGGTTCAAAGTTAGGGTCCACAAGAGAACTTAA 1572 0.4434 MRLTFFAMFIFFALFISLGFLFLSFLSSLNNTNKPKHSPLSSTHSPPSYPIIGCLISFYQNRHRLLDWYTQHLSQSPTQTIVVRRLGSRHTIVTANPINIEYILKTNFKNFPKGKPFTEILGDLLGCGIFNVDGELWSTQRKLASHEFSTRSLKEFIVKTLEEEVQQRLIPLLESASNNNNVLDLQDILRRLTFDTICKVSLGNDPCCLDLSKPLPPLLTAFDTASEISAMRATAPLFLMWKIKRALNLGSEKSLKEAVKLVHESVHKMIAIKKKEIRSVRKGDAGNDLLTKLLEMGHDEIMVRDMVISMIMAGRDTTSAAMTWLFWLLSEQPSKAELIVKEVKEVFGGKNNGGEVDELMRPFDYEGLKEMKFLKACLCESMRLYPPVAWDSKHAASEDVLPDGTLVNKGDRVTYFPYGMGRMEMLWGKDFDEFKPDRWFNEPGEDHINGVLKSVNPYKFPVFQAGPRVCLGKEMAFIQMEYVVASILNRFEIRPVSVDQPVFVPLLTAHMAGGFKVRVHKRT 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3950g00002 523 Gene3D Cytochrome P450 31 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3950g00002 523 SUPERFAMILY Cytochrome P450 38 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3950g00002 523 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3950g00002 523 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3950g00002 523 PRINTS E-class P450 group I signature 460 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3950g00002 523 PRINTS E-class P450 group I signature 470 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3950g00002 523 PANTHER CYTOCHROME P450 29 517 - -
Gabi3950g00002 523 Pfam Cytochrome P450 45 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3950g00002 523 FunFam Cytochrome P450 37 523 - -
Gabi3950g00002 523 CDD CYP86A 79 515 - -
Gabi3950g00002 523 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3950g00002 523 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3950g00002 523 PRINTS P450 superfamily signature 470 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3950g00002 523 PRINTS P450 superfamily signature 461 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3950g00002 Gabi-Chr3950 37793 42075 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3950g00002 3 523 Cytochrome P450 AT3G48520 58.891 0.0 614
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3950g00002 K20665 - gmx:100810294 724.161