Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3947g00057 ATGAAATTTTTAGTGAGCGTTTTCCTTATATTATGCTTTGCGTCCACCTTGATCATTGTGATGGTCACAATGGAACCAGCACAGTATTTGTTCGGAACTCATGAATATTATATCCGAGTAATCAATGGCTTCACCGACAATTCTTCTGTGCCTTTGGTTATTTGGTGTTCGTCGGAGGATATGGATCTTGGTGGGCGTGCCCTTCAAGAGCATGATGAGTTTAGCTGGATTATGAGGCCCAATTTTTGGAGCAGCAACCACATGAAGTGCACAATGAAATGGGACAACATAAGGAAGAGTTTTGATGCATTTAAGGCTTCTAGGGACACATATCGTTGTGGCCTTCATAGAATGTGCTCTTGGATGGTCACACAAGATGGATTTTATTTCAGCAACGATGATGTCAATTGGAGGAAGCAATTCTTGTGGTGA 432 0.4167 MKFLVSVFLILCFASTLIIVMVTMEPAQYLFGTHEYYIRVINGFTDNSSVPLVIWCSSEDMDLGGRALQEHDEFSWIMRPNFWSSNHMKCTMKWDNIRKSFDAFKASRDTYRCGLHRMCSWMVTQDGFYFSNDDVNWRKQFLW 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3947g00057 143 PANTHER - 34 137 IPR010264 -
Gabi3947g00057 143 Pfam Plant self-incompatibility protein S1 38 143 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3947g00057 Gabi-Chr3947 696198 696629 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3947g00057 50 136 Carbohydrate Esterase AT3G16970 30.769 4.21e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3947g00057 - - gmx:100792052 259.225