Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3947g00045 ATGGCTAACTACTCCAACCCTCATATCTGCCAATGTTTGAGTCGCTTGCTAACCTTCCGGCGACACTTTCCGGTCACTATCTCCGGCCACCGCCGCAGGACCGGCCAACAGTTGGTGGAGGAAGTGTTGTCCCTAGCACAAGGCCTAATCCAGCTAGGAGTCACACCAGGTGACGTGGTCGCCATCTCTGCTTACAATAGTGATTGGTATCTGGAGTGGTTATTAGCCATTGCATATGTTGGAGGGATAGCTGCTCCTCTGAACTATCGCTGGAGTTTTGAAGAGGCAAGATTAGCAATGACTGCAGTGAGGCCAGTGATGTTAGTGACTGATGAGAGCTGCTATACGTGGTGCTTAAAACTCCAGAAAAATGATATTCCATCTCTGAGGTGGCTTATTTTGTTGGATTCCCCTTCCTTAAATTTTACAAAGAAGTGGAATGTGTTAACCCCGGAAATGATTAAGAGGCATCCTGTAAAGCCTCTATCATTTAATTACTCCTGGGCATCTGAAGGAGCTGTCATAATATGCTTTACATCAGGAACTACGGGAAAGCCTAAGGGAGTCACCCTAAGCCATGGAGCTTTGATCACACAATCCCTAGCCAAGATTGCCGTAGTTGGGTACAGTGAGGATGATGTCTATCTGCATACTGCTCCATTATGCCATATTGGTGGCTTGTCATCAGCCATGGCCATGCTTATGGTTGGTGGTTGCCATGTCTTGTTGCCAAAGTTTGATGCAAACTCAGCTGTTGGTGCCATACAGCAATTTTCCGTGACATCTTTTATAACAGTTCCTGCAATAATGGCCAGTCTGATTTCTGTAATTAGGCACAAACAGACCTGGAAAGGCGGAGAAACTGTCAAGAAAATACTTAATGGGGGTGGAAGCCTCTCACTTGAGCTCATCAAGGACACTAGCATATTCTTCCATAAAGCCAAGCTTATTTCAGCTTATGGGATGACAGAGACATGCTCTTCATTGACATTCCTAACACTCTATGATCCAATGCATGAAACCACAAGCCATCCCCTTCAAATATTTGGTGTGGCAGGATCCAATATAATTCACCAGCCACAAGGTGTTTGTGTTGGCAAGGCTGCACCCCATGTAGAACTGAAGATATGTGCAGATGCCTCTGGTCACATTGGGAGAATTTTAACTAGAGGACCACATACAATGCTCAGGTATTGGGATCAAATCCTCACAAACCCATTAAATCAGAGGAATGAAGTATGGTTTGACACAGGTGACATTGGATCTATTGACTGTTATGGCAATTTGTGGCTCCTTGGACGAACAAATGGTCGTATCAAGAGTGGTGGGGAGAATATTTACCCTGAAGAGTAG 1353 0.4516 MANYSNPHICQCLSRLLTFRRHFPVTISGHRRRTGQQLVEEVLSLAQGLIQLGVTPGDVVAISAYNSDWYLEWLLAIAYVGGIAAPLNYRWSFEEARLAMTAVRPVMLVTDESCYTWCLKLQKNDIPSLRWLILLDSPSLNFTKKWNVLTPEMIKRHPVKPLSFNYSWASEGAVIICFTSGTTGKPKGVTLSHGALITQSLAKIAVVGYSEDDVYLHTAPLCHIGGLSSAMAMLMVGGCHVLLPKFDANSAVGAIQQFSVTSFITVPAIMASLISVIRHKQTWKGGETVKKILNGGGSLSLELIKDTSIFFHKAKLISAYGMTETCSSLTFLTLYDPMHETTSHPLQIFGVAGSNIIHQPQGVCVGKAAPHVELKICADASGHIGRILTRGPHTMLRYWDQILTNPLNQRNEVWFDTGDIGSIDCYGNLWLLGRTNGRIKSGGENIYPEE 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3947g00045 450 CDD AFD_class_I 176 450 - -
Gabi3947g00045 450 SUPERFAMILY Acetyl-CoA synthetase-like 8 450 - -
Gabi3947g00045 450 ProSitePatterns Putative AMP-binding domain signature. 176 187 IPR020845 -
Gabi3947g00045 450 Gene3D - 3 434 IPR042099 -
Gabi3947g00045 450 PANTHER ACYL-COA SYNTHETASE 5 450 - -
Gabi3947g00045 450 Pfam AMP-binding enzyme 26 441 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3947g00045 Gabi-Chr3947 590442 596670 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3947g00045 45 450 Monolignol Biosynthesis Gene Families AT3G21240 28.401 1.82e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3947g00045 K14760 - gmx:100809925 773.081