Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3947g00044 ATGACTGCAGTGAGGCCAGTGATGTTAGTGACTGATGAGAGCTGCTATACGTGGTGCTTAAAACTCCAGAAAAATGATATTCCATCTCTGAGGTGGCTTATTTTGTTGGATTCCCCTTCCTTAAATTTTACAAAGAAGTGGAATGTGTTAACCCCGGAAATGATTAAGAGGCATCCTGTAAAGCCTCTATCATTTAATTACTCCTGGGCATCTGAAGGAGCTGTCATAATATGCTTTACATCAGGAACTACGGGAAAGCCTAAGGGAGTCACCCTAAGCCATGGAGCTTTGATCACACAATCCCTAGCCAAGATTGCCGTAGTTGGGTACAGTGAGGATGATGTCTATCTGCATACTGCTCCATTATGCCATATTGGTGGCTTGTCATCAGCCATGGCCATGCTTATGGTTGGTGGTTGCCATGTCTTGTTGCCAAAGTTTGATGCAAACTCAGCTGTTGGTGCCATACAGCAATTTTCCGTGACATCTTTTATAACAGTTCCTGCAATAATGGCCAGTCTGATTTCTGTAATTAGGCACAAACAGACCTGGAAAGGCGGAGAAACTGTCAAGAAAATACTTAATGGGGGTGGAAGCCTCTCACTTGAGCTCATCAAGGACACTAGCATATTCTTCCATAAAGCCAAGCTTATTTCAGCTTATGGGATGACAGAGACATGCTCTTCATTGACATTCCTAACACTCTATGATCCAATGCATGAAACCACAAGCCATCCCCTTCAAATATTTGGTGTGGCAGGATCCAATATAATTCACCAGCCACAAGGTGTTTGTGTTGGCAAGGCTGCACCCCATGTAGAACTGAAGATATGTGCAGATGCCTCTGGTCACATTGGGAGAATTTTAACTAGAGGACCACATACAATGCTCAGGTATTGGGATCAAATCCTCACAAACCCATTAAATCAGAGGAATGAAGTATGGTTTGACACAGGTGACATTGGATCTATTGACTGTTATGGCAATTTGTGGCTCCTTGGACGAACAAATGGTCGTATCAAGAGTGGTGGGGAGAATATTTACCCTGAAGAGGTTGAGGCAATTCTACGAGAACATCCAGGGATTGCTAGTGTTGTTGTTGTGGGAATCCCAGATGCTTACCTGACAGAGATGGTGGCAGCATGTATCCAACTAGGAGAAAATTGGCAATGGTCAGAGCAATCAGCTTCAAATGAAGAGTTTCACCTATCTAGAAAGAATCTCCAGCAATATTGCATGGAAAATAATTTAAGCAGGTTTAAGATACCGAAAATATTTATTGTATGGAAGAAGCCTTTTCCACTCACTACCACAGGAAAAATAAGAAGAGACCAAGTTGGAAAGGAAGTTATGTCTCATTTACAATCTTTGCATAGTAATCTTTGA 1386 0.4221 MTAVRPVMLVTDESCYTWCLKLQKNDIPSLRWLILLDSPSLNFTKKWNVLTPEMIKRHPVKPLSFNYSWASEGAVIICFTSGTTGKPKGVTLSHGALITQSLAKIAVVGYSEDDVYLHTAPLCHIGGLSSAMAMLMVGGCHVLLPKFDANSAVGAIQQFSVTSFITVPAIMASLISVIRHKQTWKGGETVKKILNGGGSLSLELIKDTSIFFHKAKLISAYGMTETCSSLTFLTLYDPMHETTSHPLQIFGVAGSNIIHQPQGVCVGKAAPHVELKICADASGHIGRILTRGPHTMLRYWDQILTNPLNQRNEVWFDTGDIGSIDCYGNLWLLGRTNGRIKSGGENIYPEEVEAILREHPGIASVVVVGIPDAYLTEMVAACIQLGENWQWSEQSASNEEFHLSRKNLQQYCMENNLSRFKIPKIFIVWKKPFPLTTTGKIRRDQVGKEVMSHLQSLHSNL 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3947g00044 461 ProSitePatterns Putative AMP-binding domain signature. 77 88 IPR020845 -
Gabi3947g00044 461 CDD AFD_class_I 77 442 - -
Gabi3947g00044 461 Gene3D - 338 453 IPR045851 -
Gabi3947g00044 461 Gene3D - 1 335 IPR042099 -
Gabi3947g00044 461 Pfam AMP-binding enzyme 6 342 IPR000873 -
Gabi3947g00044 461 Pfam AMP-binding enzyme C-terminal domain 351 440 IPR025110 -
Gabi3947g00044 461 PANTHER ACYL-COA SYNTHETASE 3 449 - -
Gabi3947g00044 461 SUPERFAMILY Acetyl-CoA synthetase-like 4 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3947g00044 Gabi-Chr3947 589700 596466 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3947g00044 77 448 Monolignol Biosynthesis Gene Families AT4G19010 27.907 1.41e-32 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3947g00044 K14760 - gmx:100809925 795.808