Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3947g00038 ATGGGGAATGTCCTTTGCGAGGGACTCTTTATTATGTTGATTCTGGTGACAGTGGGCACTGTTGAGGCCCAACCAAAGCCGTTTCTCATAAATTGTGGTTCAAATTCTTCTGTAAATGTGGATGGTAGGAGATGGATTGGGGACATGGCCCCAAATAACAATGTCACCCTCAGCTCCCCTGGTGTTGCTGCTTCCACTTCTACTACATCAAGTGGCAATTCAATCTATGATCCCCTCTACAAAACAGCCAGAATTTTCACAGCTTCTTTAAATTATACAATCAAAGAAGTTCAGGGAAACTATTTTGTTAGGTTCCATTTCTTCCCCTTTGTGACTGAGGACTACAATGTAAATGAGTCCTCATTTGGTGTTGTGGTCAATGGTGTCAAACTATTGTCAGAGTTTGATGTTCAAGGTAAGATATCCCACAAGAATATGAACTTGCAGAATTCTGGGAAGAATTCTAGTTCATTCTTCTTGGTTAAAGAGTATCTTCTGGCTATCAATGCAGATATGCTTGTGATTGAGTTTGTTCCAACTGGAAGCTCATTTGGCTTCATCAATGCCATTGAGATTGTCCCAGTTGTGGATGAGCTTTTTGCTGGCTCAGTCAGCAAAGTTGGTGGAAGTGGTGGAAACTTAAATTTGACTGGACGCGGGATGGAGACTATGTATAGGTTAAATGTTGGTGGCCCTGAGATTCAATCCAATGAGGATCTAGATCTTTGGAGAGCTTGGGAAGTGGATTCTGGCTATATGATCACAGAAAATGCTGGGTCAGAAATGAAGAACAGTTCTAATATTAAATATGCTTCCCCCAATGATACTTCAGTGGCTCCTCTCCTTGTGTATGAAACTGCAAGGGCAATGTCTAACAATGAAGTCTTGGACAAAAGGTTTAACATGTCATGGAAATTTGAAGTAGATCCTGATTTTGATTATTTGGTTCGGTTACATTTCTGTGAGCTGGTTTATGATAAGTCAAATGAGAGAATATTCAGGATCTACATAAACAACAGAACAGCTGCAGATAATGTTGATATTTTTGTAAGAGCAGGAGGGAAGAATAAAGCATATCACCAAGATTATTTTGATTCCTTGTCATTGAGGACTGACACACTTTGGGTTCAACTTGGTCCTGATACAGCTGCTGGTGCTGCAGGAACTGATGCTCTCTTGAATGGTTTAGAGATTTTCAAGCTTAGTCGAAATGGGAATCTTGCCTATGTGGAGAGATATGACTCAGATGGCAATTCATTAAGCAAATCAAAATCAAGAGTTATTTGGGTGGGAGTTGGAGCAGGTCTAGCTTCTGTAGCTATAATTGCACTTATAATTGTTCTTGTTTTCTGTTTCTGCAAAAGCCGGAGGAAAGAATCAAGTGATACCAAGAACAACTCTCCGGGTTGGCGACCGTTATTCCTATATGGGGCTGCACTGAACAGCACATCAGCAGGAACTCAAAAGCAATATGGATCTGTGGCTTCAACAACCAGAGTTGGCAAGAGGTTTACATTGGCTGAAATCAATGCTGCAACAAATAATTTTGATGAGAGTTTGGTAATTGGAGTCGGAGGCTTTGGTAAGGTGTATAAAGGTGAGCTTGATGATGGTGTCCTTGCTGCAATTAAGCGTGCCAACCCGCAATCTGAGCAAGGACTAGCTGAATTTGAGACAGAAATTGAGATGCTCTCCAAACTCAGACACAGGCATCTGGTGTCCTTGATTGGTTTCTGTGAAGAGAAAAATGAAATGATCTTGGTTTATGAGTATATGGCTAATGGAACTGTTAGAAGTCATCTATTTGGGAGTGATCTCCCTCCATTAACATGGAAGCAACGTCTAGAAGTGTGCATTGGTGCTGCAAGGGGACTTCATTACCTTCATACCGGAGCCGAGCGCGGAATAATTCACAGGGATGTGAAGACAACCAATATATTGTTAGATGAGAATTTTGTAGCCAAAATGTCTGATTTTGGGTTGTCAAAAGATGGTCCTGCTTTTGACCATACTCATGTTAGTACAGCTGTGAAAGGAAGTTTTGGTTATCTAGACCCGGAATACTTCAGAAGACAGCAATTAACTGAGAAATCAGATGTTTACTCCTTTGGAGTTGTGTTGTTTGAAGTTGTTTGTGCTAGAGCTGTAATAAATCCTACCTTGCCTAAAGATCAGATCAATCTTGCAGAATGGGCAATGAGATGGCAAAGGCAAAGATCACTTGACACAATTATTGACACACACCTTAGAGGAAATTGTTGCCCAGAATCCTTGTCTAAGTTTGGGGAGATAGCAGAAAAATGTCTTGCTGATGATGGGAAGAGCCGCCCCACAATGGGGGAGGTGTTATGGCACTTGGAGTATGTCTTGCAGTTACATGAAGCTTGGCTCAACATGGATACCAAAGAAGCTTCCTTCTCAAGTAGTCATGCTTTGAGGAGTCTCAAAGATGGAGGACTAGAAGGGGTACTAGAGCCTTCAAATCAAGATGAAGAGTTTGGTTTTGAGGTACTAGAGCCTTCAAATCAAGATGAAGAGTTTGGTTTAGACCTCAAACACACAAGTGATTGA 2571 0.4127 MGNVLCEGLFIMLILVTVGTVEAQPKPFLINCGSNSSVNVDGRRWIGDMAPNNNVTLSSPGVAASTSTTSSGNSIYDPLYKTARIFTASLNYTIKEVQGNYFVRFHFFPFVTEDYNVNESSFGVVVNGVKLLSEFDVQGKISHKNMNLQNSGKNSSSFFLVKEYLLAINADMLVIEFVPTGSSFGFINAIEIVPVVDELFAGSVSKVGGSGGNLNLTGRGMETMYRLNVGGPEIQSNEDLDLWRAWEVDSGYMITENAGSEMKNSSNIKYASPNDTSVAPLLVYETARAMSNNEVLDKRFNMSWKFEVDPDFDYLVRLHFCELVYDKSNERIFRIYINNRTAADNVDIFVRAGGKNKAYHQDYFDSLSLRTDTLWVQLGPDTAAGAAGTDALLNGLEIFKLSRNGNLAYVERYDSDGNSLSKSKSRVIWVGVGAGLASVAIIALIIVLVFCFCKSRRKESSDTKNNSPGWRPLFLYGAALNSTSAGTQKQYGSVASTTRVGKRFTLAEINAATNNFDESLVIGVGGFGKVYKGELDDGVLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCEEKNEMILVYEYMANGTVRSHLFGSDLPPLTWKQRLEVCIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKDGPAFDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLAEWAMRWQRQRSLDTIIDTHLRGNCCPESLSKFGEIAEKCLADDGKSRPTMGEVLWHLEYVLQLHEAWLNMDTKEASFSSSHALRSLKDGGLEGVLEPSNQDEEFGFEVLEPSNQDEEFGLDLKHTSD 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3947g00038 856 CDD STKc_IRAK 522 787 - -
Gabi3947g00038 856 FunFam Putative receptor-like protein kinase 27 195 - -
Gabi3947g00038 856 ProSitePatterns Serine/Threonine protein kinases active-site signature. 636 648 IPR008271 GO:0004672|GO:0006468
Gabi3947g00038 856 PANTHER OS07G0166700 PROTEIN 502 793 IPR045272 GO:0004714|GO:0006468
Gabi3947g00038 856 FunFam Receptor-like protein kinase FERONIA 220 403 - -
Gabi3947g00038 856 Gene3D Transferase(Phosphotransferase) domain 1 592 810 - -
Gabi3947g00038 856 SMART serkin_6 516 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3947g00038 856 SUPERFAMILY Protein kinase-like (PK-like) 494 788 IPR011009 -
Gabi3947g00038 856 FunFam receptor-like protein kinase FERONIA 480 591 - -
Gabi3947g00038 856 ProSitePatterns Protein kinases ATP-binding region signature. 522 544 IPR017441 GO:0005524
Gabi3947g00038 856 ProSiteProfiles Protein kinase domain profile. 516 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3947g00038 856 FunFam Receptor-like protein kinase FERONIA 592 806 - -
Gabi3947g00038 856 Pfam Malectin-like domain 30 400 IPR024788 -
Gabi3947g00038 856 Gene3D Phosphorylase Kinase; domain 1 478 591 - -
Gabi3947g00038 856 Gene3D - 220 403 - -
Gabi3947g00038 856 Gene3D - 27 195 - -
Gabi3947g00038 856 Pfam Protein tyrosine and serine/threonine kinase 521 784 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3947g00038 Gabi-Chr3947 557250 560350 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3947g00038 7 812 Receptor kinase-like Gene Family AT1G30570 67.078 0.0 1143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gabi3947g00038 Malectin_like 9.6e-34 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3947g00038 - - gmx:100791403 1400.96