Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3947g00036 ATGAAACTCTTTAACCTTTTAGTGTTATCTTTATCTTTCTTCTCTGTTGTGGGGCAGCTTCCTTCCCAGGACATTTTAGCATTGCTGGAATTTAAGAAAGGCATCAAACATGACCCTACTGGTTTTGTCCTCAATTCCTGGAATGAGGAATCCATTGACTTTGATGGATGCCCATCTTCATGGAATGGAGTTCTGTGTAATGGTGGTAATGTTGCTGGGGTTGTCCTTGATAACTTGGGTCTCTCTGCCGACACTGACTTAAGTGTATTTACAAACCTCACAAAACTTGTGAAACTCTCCATGGCCAACAATTCCGTATCAGGAAAACTACCTGATAACATTGCTGATTTCAAAAGCCTTGAATTCCTGGATATCTCCAATAACCTCTTTTCCTTATCCTTACCATTGGGAATTGGTAACTTAGGTAGCCTGCAGAATGTGTCGTTGGCTGGAAATAACTTCTCTGGCCCAATTCCTAACTCTATTTCAGAAATGGCTTCCATCAAGTCTCTGGACTTGAGCCGCAACTCCTTTTCCGGAGCACTTCCAGCATCATTGACTAAGCTGACTACCCTTGCATCTCTAAACTTGTCTCATAATGGCTTCACTGGAAAAATTCCCCCAGGTTTTGAGCAGATCTCTGCTCTTGAAAAACTTGACTTACATGGGAATATGCTTGATGGTCATTTAGATGCTACATTTATGCTTTTATCAAGTGCCAGCTATGTTGATTTCAGTGAGAACATGCTGTTGAGTTCTGATTCCCAGCAGCAGAAGTTTCTACCGCGAATATCTGAAAGTATTAAGTATCTGAATCTAAGTCACAACCAGCTTACTGGGTCATTGGTTAGTGTAGCCGAGCAACCTGTTTTTGAAAACTTGAAGGTGTTGGACCTCAGCTACAATCAATTGTTTGGAGAATTGCCTGGATTTGATTTTGTTTATGATCTTCAGGTCCTTAAGCTTAGCAATAACAAATTTTCAGGATATATTCCTAATGGTCTACTAAAAGGAGACTCTTTGGTTTTAACTGAACTTGATTTGAGTGCCAACAATCTCTCAGGGTCACTTGGTATAATTACATCAACAACACTGCACTTTCTTAATCTCTCGTCGAATGGGTTCACTGGTGAGCTGCCTCTGCTGACTGGAAGCTGTGCTGTACTTGATCTGTCAAATAACAAAATAGAAGGAAATTTGACCAGGATGTTGAAATGGGGGAATATAGAATTTCTTGATCTCAGTGGGAACCATTTGACAGGGTTCATCCCTGAGGTAACTCCTCAATTTTTGAGACTAAATTATTTGAATCTATCCCATAATTCTCTTAGCAGCTTCCTCCCAAGAGTGCTAACACAGTATCCAAAGCTTAGATTGCTTGATATTAGTTCCAACCAATTAGATGGACTACTTCTAGCTGATCTGTTCACAATGGCCACATTGCAAGAGCTCCATCTTGAAAATAATATGTTTTCTGGTAGCATCAATTTATCATCTTCTCCTGGCCAATCTGATCTTCAGATTCTTGATCTTTCTCACAATCAGCTTAATGGCTATTTTCCTGATAAGTTTGGGTCATTAACTGGCCTTAAAGTGCTCAATATTGCTGGAAATAATTTTTCTGGTTCTCTTCCGACGACCATTGCTGATATGAGTTCACTAGACGATCTGGATATATCAGAGAATCATTTTACTGGTCCTCTTCCAAATAACATGCCAAAGGGACTCAAAAACTTTAATGCTTCACAAAATGATCTGTCTGGAGTTGTCCCAGAAGTTCTTAGGAAGTTCCCTAGTTCTTCTTTCTTTCCTGGGAATGCTATGTTACATTTTCCTAACAGTCCTCCTGGATCAACCACTTCCCTTACTGAAAATTCCAAGAGGAAGCCTATGAACACTATTGTTAAAGTAATAATTATAGTGTCATGTGTGGTTGCTCTCTTCATATTAATATTGATGGCTGTCTTCATTCACTACATACGTATGTCAAGATCTCCACCAGAATATGATACAAGTAAGGATATCCATGGGCGTGCTCAGCCAATTATCTCTGGTCCTGTTCGTGCAACAGACAGGGGTGGTGCTTTGGTTGTATCAGCTGAGGATCTTGTGACCTCACGTAAAGGTTCACCATCAGAAGTAATCAGCCCTGATGAAAAAATGGCAGCTGTAACTGGGCTCTCCCCTTCAAAGCACAGCCACTTTTCATGGTCACCAGAATCTGGTGAATCATTGACTGCTGAAAATCTCTCAAGACTAGACGCAAGATCACCAGATAGGTTGATTGGAGAACTGCATTTTCTTGATGACACAATAACATTGACACCTGAGGAGCTCTCAAGGGCCCCAGCTGAAGTATTGGGTAGAAGTAGTCATGGTACTTCTTACAAGGCAACTCTGGAGAATGGTTTATTGTTGAGAGTGAAGTGGTTGAGAGAAGGAGTGGCAAAACAGAGAAAAGAATTTGTTAAAGAGACAAAGAAATTTGCAAACATCAGGCATCCAAATGTCGTGGGATTGAGAGGATATTATTGGGGTCCTACGCAGCACGAGAAGCTTATTCTTTCAGATTACATATCACCAGGAAGTCTTGCAAGTTTTCTTTATGATCGTCCAGGAAGAAAAGGTCCGCCATTAACTTGGGCCCAGAGGCTCAAAATAGCAGTTGATGTAGCACGTGGCCTAAACTATCTGCATTTTGATCGCGCTGTTCCACATGGGAACCTCAAAGCTACAAATGTGTTGTTAGATACAGCTGATATGAATGCACGTGTTGCCGATTACTGCCTTCACCGACTTATGACTCAGGCCGGTACCATTGAACAGATTCTTGATGCTGGGGTGTTAGGTTATCGCGCACCGGAGTTAGCTGCTTCCAAGAAGCCAATGCCCTCTTTCAAATCAGATGTTTATGCTTTTGGAGTGATACTTTTGGAACTTTTAACTGGAAGGTGTGCTGGTGATGTGATATCTGGTGAGGAGGGAGGTGTTGATCTTACAGATTGGGTAAGATTGCGGGTAGCAGAAGGTAGAGGCTCAGAATGTTTTGATGTTACCTTGATGCCAGAAATGGGTAATTCAGTTATAGAAAAGGGAATGAAGGAGGTCCTAGGAATAGCAATTCGATGCATTAGATCAGTATCTGAGAGGCCTGGTATCAAGACTATATATGAAGATCTTTCTTCTATATAG 3192 0.4117 MKLFNLLVLSLSFFSVVGQLPSQDILALLEFKKGIKHDPTGFVLNSWNEESIDFDGCPSSWNGVLCNGGNVAGVVLDNLGLSADTDLSVFTNLTKLVKLSMANNSVSGKLPDNIADFKSLEFLDISNNLFSLSLPLGIGNLGSLQNVSLAGNNFSGPIPNSISEMASIKSLDLSRNSFSGALPASLTKLTTLASLNLSHNGFTGKIPPGFEQISALEKLDLHGNMLDGHLDATFMLLSSASYVDFSENMLLSSDSQQQKFLPRISESIKYLNLSHNQLTGSLVSVAEQPVFENLKVLDLSYNQLFGELPGFDFVYDLQVLKLSNNKFSGYIPNGLLKGDSLVLTELDLSANNLSGSLGIITSTTLHFLNLSSNGFTGELPLLTGSCAVLDLSNNKIEGNLTRMLKWGNIEFLDLSGNHLTGFIPEVTPQFLRLNYLNLSHNSLSSFLPRVLTQYPKLRLLDISSNQLDGLLLADLFTMATLQELHLENNMFSGSINLSSSPGQSDLQILDLSHNQLNGYFPDKFGSLTGLKVLNIAGNNFSGSLPTTIADMSSLDDLDISENHFTGPLPNNMPKGLKNFNASQNDLSGVVPEVLRKFPSSSFFPGNAMLHFPNSPPGSTTSLTENSKRKPMNTIVKVIIIVSCVVALFILILMAVFIHYIRMSRSPPEYDTSKDIHGRAQPIISGPVRATDRGGALVVSAEDLVTSRKGSPSEVISPDEKMAAVTGLSPSKHSHFSWSPESGESLTAENLSRLDARSPDRLIGELHFLDDTITLTPEELSRAPAEVLGRSSHGTSYKATLENGLLLRVKWLREGVAKQRKEFVKETKKFANIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNVLLDTADMNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPMPSFKSDVYAFGVILLELLTGRCAGDVISGEEGGVDLTDWVRLRVAEGRGSECFDVTLMPEMGNSVIEKGMKEVLGIAIRCIRSVSERPGIKTIYEDLSSI 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3947g00036 1063 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 358 615 - -
Gabi3947g00036 1063 Pfam Leucine rich repeat N-terminal domain 22 67 IPR013210 -
Gabi3947g00036 1063 Gene3D Phosphorylase Kinase; domain 1 773 858 - -
Gabi3947g00036 1063 FunFam LRR receptor-like serine/threonine-protein kinase GHR1 20 265 - -
Gabi3947g00036 1063 SUPERFAMILY L domain-like 267 594 - -
Gabi3947g00036 1063 Gene3D Ribonuclease Inhibitor 22 185 IPR032675 -
Gabi3947g00036 1063 ProSiteProfiles Leucine-rich repeat profile. 293 315 IPR001611 GO:0005515
Gabi3947g00036 1063 ProSiteProfiles Protein kinase domain profile. 781 1063 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3947g00036 1063 Pfam Leucine rich repeat 412 467 IPR001611 GO:0005515
Gabi3947g00036 1063 Pfam Leucine rich repeat 506 564 IPR001611 GO:0005515
Gabi3947g00036 1063 Pfam Leucine rich repeat 168 226 IPR001611 GO:0005515
Gabi3947g00036 1063 Pfam Protein tyrosine and serine/threonine kinase 785 983 IPR001245 GO:0004672|GO:0006468
Gabi3947g00036 1063 FunFam Pollen receptor-like kinase 1 859 1063 - -
Gabi3947g00036 1063 Gene3D Ribonuclease Inhibitor 187 257 IPR032675 -
Gabi3947g00036 1063 PANTHER OS07G0626500 PROTEIN 7 1063 - -
Gabi3947g00036 1063 Gene3D Transferase(Phosphotransferase) domain 1 860 1063 - -
Gabi3947g00036 1063 FunFam Leucine-rich repeat receptor-like protein kinase 766 858 - -
Gabi3947g00036 1063 SUPERFAMILY L domain-like 41 380 - -
Gabi3947g00036 1063 SUPERFAMILY Protein kinase-like (PK-like) 784 1060 IPR011009 -
Gabi3947g00036 1063 Pfam Leucine Rich Repeat 293 309 IPR001611 GO:0005515
Gabi3947g00036 1063 Gene3D Ribonuclease Inhibitor 258 619 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3947g00036 Gabi-Chr3947 530708 535551 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3947g00036 1 1051 Receptor kinase-like Gene Family AT1G55610 26.882 6.78e-79 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gabi3947g00036 PK_Tyr_Ser-Thr 2.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3947g00036 - - gmx:100793639 1831.99