Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3947g00023 ATGGTTGGTGTTGGGATGAGCATAAGGATATTTTTATTGGTGAGTCCAACATCTCGAAGTGGGTTGGAGTTAGATCGAATCATATTGCTTAGGCTGGTAGATACTCTAAATGAGCGAGCAGATAACAATGCTCTTCGTGCTGAGAATGAAAGGATCAATAACGAGAACCTTGCATTGAGGGAGGCTTTGAAGAAAATAATTTGCCCATCTTGCGGTGGTCCACCTTGTGGAGATGAGCACGCCATCAAACATCTTCAGCTTCAAAATGCTCGTCTAAAAGAACAGCATGAGAAGGTGTCTATATTTCTTGCAAGGTTCATACAAAAACCGATTTCACATCCAGAGTTGCAGCTAGCTCCTCCTTCCGCAGGATCTTCATATGATTTATCACTAGGAAGTACTCCAAAATTAAGTGTTGATGGTAGTTTTCTGAATCTAGGTGTTGGTTCAACAAGTCTTTCATTTTCAGATGAAGACATGTTGCCACATGAAACGAACGAAAGGGAAGAATTGGAAAAAGCACTAATGTTTGAGATTGCAATATCTGCTAAGGAAGAGTTACTTAAGCTTTTGGACACTAATGAGCCTATATGGGTCAAGTCTTCAACTGATCGGAGATATATGCTTCATCCTGAAACCTATGAAATGGTCTTTCCTTTGGGTAGTCACTTCAAAACTTCCACTGCTCGTGTTGAATCTTCCAAAGATTCACGAATAGTGAGAATTAAGCCTATGCAATTAATTGACATGTTCTTAGATTCGGAAAAATGGATAAATCTTTTCCCTACAATTATTTCAAAAGCTCACACAATCAAAGTATTTGAAAGCGGGATGTCAGAGAATCGAAGTGGAGCTTTGCAATTGATGTATGAGGAGATGCATGTTCTTTCACCTATAGTGCCATCTCGGGAATTCTACTTCCTTCGCTATTGTCACCAGGTTGAAGCTGGTATATGGGTGATAGTTGATGTATCGTTTGATTACTTGAAAGAGGAAGACGACCCTTTCAACCCTCTTTCTCGCTCTTGGAGGTTTCCCTCGGGTTGCATGATTCACAAAATAGCTGATGGCTCAACCCAGGTTACATGGGTTGAACATGTTGAACTGGATGAAAAGTTCCAAACGCATCGGCTGTATAGAGACCTTGTTAATAAAAGTATTGCGTATGGAGCAGAAAGATGGCTTATGGAGCTTCAAAGAATGTGTGAAAGATTAACAAGCGCCGCTGCTGAATACGTACCTAGTTATGATTCCGGAGTGGTCACTATACCTGAAGGAAGGAGGAGTGTGATAAAACTTGCTCATAGAATGGTTAAGAATTTTTGTGAAATTTTAAACATGTCAAGCAAGATGGACTTCCCGCAACATTTAACTGAGGAGAGTAATAGTGGGGTTAGGATCGCTGTTCGCAAAAACACTGACCCAAATGGCCTGCCAAATGGCATGCTTGTTGTTACTGCTGCTAGCTCATTTTGGCTTCCATTCCCTTCACAGATTCTTTTTGATTTCTTCAAAGATGCTAGAGAACGTATCAAGTGGGATAATCTTTGTTCTGGGTATTCAATGCATGAGATTTCACACATCTCAAACGGAACTCATCCGAACAACTATGTAGCAATTATTCGGTCATTGAACCCAAATGCGAACAATGTGTTTCTTCTTCAAGAATGTTTTATAGATCCATTGGGAGCATATGTTATATATGCTCCAGTTAAGGTACCAGACATAAATTTAGCTGTGAATGGTGGAGATTCATCAATGGTGTCAATTCTCCCATCAGGCATTGTCATCTCTGAAGATGCTCCATCTATTATAAATGCTCGAGCATCTAGTAGCAGTGGAAATAGTGGTAAAGGATCACCAAGAGGTTCACTGGTGACTGTGGCTTTCCAAATTCTGATGCCTAACCCAGCTGTAGTGAACATGGAATCTGTGGCTGGTGTTAATGCAATCATAACCTCAACAGTTCAAAACATTAAGGATGCTTTGATCAAAGACTCCGATTGA 2007 0.4041 MVGVGMSIRIFLLVSPTSRSGLELDRIILLRLVDTLNERADNNALRAENERINNENLALREALKKIICPSCGGPPCGDEHAIKHLQLQNARLKEQHEKVSIFLARFIQKPISHPELQLAPPSAGSSYDLSLGSTPKLSVDGSFLNLGVGSTSLSFSDEDMLPHETNEREELEKALMFEIAISAKEELLKLLDTNEPIWVKSSTDRRYMLHPETYEMVFPLGSHFKTSTARVESSKDSRIVRIKPMQLIDMFLDSEKWINLFPTIISKAHTIKVFESGMSENRSGALQLMYEEMHVLSPIVPSREFYFLRYCHQVEAGIWVIVDVSFDYLKEEDDPFNPLSRSWRFPSGCMIHKIADGSTQVTWVEHVELDEKFQTHRLYRDLVNKSIAYGAERWLMELQRMCERLTSAAAEYVPSYDSGVVTIPEGRRSVIKLAHRMVKNFCEILNMSSKMDFPQHLTEESNSGVRIAVRKNTDPNGLPNGMLVVTAASSFWLPFPSQILFDFFKDARERIKWDNLCSGYSMHEISHISNGTHPNNYVAIIRSLNPNANNVFLLQECFIDPLGAYVIYAPVKVPDINLAVNGGDSSMVSILPSGIVISEDAPSIINARASSSSGNSGKGSPRGSLVTVAFQILMPNPAVVNMESVAGVNAIITSTVQNIKDALIKDSD 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3947g00023 668 CDD START_ArGLABRA2_like 173 403 - -
Gabi3947g00023 668 Gene3D - 178 409 IPR023393 -
Gabi3947g00023 668 SUPERFAMILY Bet v1-like 171 405 - -
Gabi3947g00023 668 Coils Coil 42 65 - -
Gabi3947g00023 668 ProSiteProfiles START domain profile. 169 407 IPR002913 GO:0008289
Gabi3947g00023 668 Pfam START domain 179 404 IPR002913 GO:0008289
Gabi3947g00023 668 SUPERFAMILY Bet v1-like 424 656 - -
Gabi3947g00023 668 SMART START_1 178 404 IPR002913 GO:0008289
Gabi3947g00023 668 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 35 663 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3947g00023 Gabi-Chr3947 365404 375268 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3947g00023 37 663 Homeobox Transcription Factor Family AT1G73360 42.236 4.32e-163 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3947g00023 K09338 - gmx:100794552 693.73