Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3947g00021 ATGAAGAATATACATTGCAATTCTTGTGGGGGTCCACATATTCATGATCATGAAGAGCATGAACTTGTTATGCAAAAATTGAGGCTTGAAAATGCTCAGCTAAAAGATGAGCATGAGAAGCTGTGTAACCTTATTGGAAGGTACAAAGAGGAGCCACAACCTGAGTTGCAAGAGGCTCATTTTCCTTTCACGGGATCTTCAACTGATCCAGATCTTGGATGTTTGCTAAACCAACCGGTTGAATATGGAAGTTCATCTCATGATCAAAACCATGGTGCACCAATTATGGATGATGATATATTATTGCCCAACTCAACAATGGAATGTGCAGACATAGAAAAAGCGCTCATGTTAGAAGTTGCAACTGCTGCTATGGATGAGTTAGTTAAGCTTCTCCGTATCAACGAGCCCTTATGGGTTAGGTCTTCAACTCTTGATGGAAAATGCACTCTTCATCATGAAACATATGAAAGATTATTCCCTAGGACTAATCATCACTTCAGAGGTGCCAACGTGTTTGTTGAATCATCAAAAGATTCAGGAATTGTGAGCATTAGAGGGACGCAACTAGTTGATATGATTCTAGATTCGGAAAAATTTGTTAACCTTTTCCCAACAATAGTTACAAAAGCAGACACAATCAAAGTATTTGAAAGTGGAATGTTGGGAAATCAAAGTGGAGCATTGCAATTGATGCATGAAGAAATACACATCCTGTCACCTTTAGTGCGATCTCGCGAATTTCACTTCCTTCGGTATTGTCAACAAATTGGAGTTGGTATTTGGGTGATAGTGGATGTGTCTTTTGATTTATTTCGACAGGACACCCCGCTTTCTCGCTCTTGGAGACACCCCTCGGGATGCATGATTGAGGAAATGCCTAATGGGTGTTCCATGGTCACTTGGGTTGAGCATGTAGAAGTGGATGATAGGATCCACACACACCGACTATACAGAGATATTGTTGGTACCAATATTGCATATGGAGCACACAGATGGATTATGGAACTTCAAAGGATGGGCGAGAGATTTGCTTTCTTTTATGCTGAAAACATGCATAATTATGAATCTGGAGGAGTGATCAATTCACTTGAAGGGAGGAAGAGTGTTATGAAGCTTTCTCACCGAATGGTTAAGCACTTTTGTGAAAGCTTGAACATGTCAGGCAAGCTTGACTTTCCACATTTAACTGTGGAGAATAATACTGGAGTTAGGGTTGCTGTTCACAAACTCACAGAATTAGGCCAACCAAATGGTTTGGCTGTTGCTGCTGCTACATCCCTCTGGCTTCCTCTCCATCATCACAAAGTTTTTGATTTCCTCACAGATGATAGAAAAAGAGCTCAGTGGGACATTCTTTCCAATGGAAAACCAATGAATAAGGTTGCACAAATCACAAGTGGAATTTATCCTGGCAACTGTGTATCAATTATTCGGCCATTCATTCCTAATGAGAACAACATGTTGCTTCTTCAAGAAAGTTTTACAAATCCAATGGGATCATATTTTGTGTATGCTCCAATTGATGTAGCACAAATGAATAGGATCATAAAGGATGAAAGAGACTGTTCAGTATTCCCAATTCTTCCATCAGGTTTTGTTATCTCTCCAGATGGCAAACCAAATGCAATATTTAACAATGGAAATGTTGATGGATCAGGAGGCTCATTGCTGACAATGGCTTTTCAAGTACTGATTTGTGGTCCAGGTGGAAGCCTTCTATTTAATATGGAAAATGTGGCAAATGTCAACGCTCTCTTAACCTCCACAGTTCAGAAAATAAAGGAAGCTTTCAATTGCAACACTTTGGAGTAA 1815 0.3978 MKNIHCNSCGGPHIHDHEEHELVMQKLRLENAQLKDEHEKLCNLIGRYKEEPQPELQEAHFPFTGSSTDPDLGCLLNQPVEYGSSSHDQNHGAPIMDDDILLPNSTMECADIEKALMLEVATAAMDELVKLLRINEPLWVRSSTLDGKCTLHHETYERLFPRTNHHFRGANVFVESSKDSGIVSIRGTQLVDMILDSEKFVNLFPTIVTKADTIKVFESGMLGNQSGALQLMHEEIHILSPLVRSREFHFLRYCQQIGVGIWVIVDVSFDLFRQDTPLSRSWRHPSGCMIEEMPNGCSMVTWVEHVEVDDRIHTHRLYRDIVGTNIAYGAHRWIMELQRMGERFAFFYAENMHNYESGGVINSLEGRKSVMKLSHRMVKHFCESLNMSGKLDFPHLTVENNTGVRVAVHKLTELGQPNGLAVAAATSLWLPLHHHKVFDFLTDDRKRAQWDILSNGKPMNKVAQITSGIYPGNCVSIIRPFIPNENNMLLLQESFTNPMGSYFVYAPIDVAQMNRIIKDERDCSVFPILPSGFVISPDGKPNAIFNNGNVDGSGGSLLTMAFQVLICGPGGSLLFNMENVANVNALLTSTVQKIKEAFNCNTLE 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3947g00021 604 SUPERFAMILY Bet v1-like 366 577 - -
Gabi3947g00021 604 CDD START_ArGLABRA2_like 114 342 - -
Gabi3947g00021 604 ProSiteProfiles START domain profile. 110 346 IPR002913 GO:0008289
Gabi3947g00021 604 Gene3D - 119 321 IPR023393 -
Gabi3947g00021 604 SMART START_1 119 343 IPR002913 GO:0008289
Gabi3947g00021 604 SUPERFAMILY Bet v1-like 111 344 - -
Gabi3947g00021 604 Pfam START domain 119 342 IPR002913 GO:0008289
Gabi3947g00021 604 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 599 IPR042160 -
Gabi3947g00021 604 Coils Coil 17 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3947g00021 Gabi-Chr3947 318499 326704 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3947g00021 1 602 Homeobox Transcription Factor Family AT1G73360 40.729 2.17e-149 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3947g00021 K09338 - gmx:100795075 739.954