Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi3943g00022 | ATGGCAGCTAATATTCCCGCAACAAGCTCTTCTATGACGACGTCGTTTCACCAGAAACGACATCGTTCCATATTCGAAGTTCCACCAAACTTCTTCGATTCATGTCGTCTTCTCCCTTCTCTTCACTCACCCGTTTCTGAGAACCACAACGAAGGCCTCAAAACTATTGAACCACCCTCAAACGACGTTGTTGTTGACGATGCCCCTCCAAACGCCGTCGTTTCGGCAACTAGGTTGACATGCAATACCTGCAAGGCTCAATTCGATTCCCTTCAAGACCAGCGTTCCCATTTCAAATCCGACATCCATCGATTCAATGTGAAGCTGACAATTGCTGGAAAGAATATTGTGAAGGAAGAAGATTTTGAGGTGCTTACATCTGAATCTGTCAAAGACTATGATGTGTCAAGTATTTCAGGATCAGAAAGTGATGATGACAGTGACATTGAGTCTCAAAGTCAAAAGGAAGTGCGTGACAAATCAAGTGAAAGTTTGAAACAAAAGCTACTTATATGTCTTCAGACAGGGCAGAGAGTTTCTGTCTGGAAGTGCTTGATTATGAATATGACTGAAAATGTATCGTATGAGGATGAAAAATTGAAGAACGAAGTGATTGAGAGGTTGAAATCTCTGACTATTGAGCCTAGGGATAAAACACACTTGAGGGTCGTTCTTCTTGCATCCGGTGGGCATTTTGTGGGTTGTGTCTTTGATGGTGATGCGGTTGTGACCCACAAGACATTTCACAGATATGTTGTAAGGGCCAAGGCAGGAAAAAAACAGTCATCAAAAGATGCTTCTGGCAGGGCTGCACATTCTGCTGGGGCTTCACTTCGTCGTTATAATGAACTTGCATTAAAGAAGGAAGTTCACGACCTGCTTATTGCTTGGAGACCTTATTTCGATGCTTGCAATTGCATTTTTATAAATGCACCTTCAAGTAGTCGTCAACTGCTTTATGATGGAGAAAGACCATATTTTACCAATCGGCAGTGTGCTATTAGAAATATTGCTTTGACTGTACGGAGGCCTACTTTCAGGGAAGCAAAGCGTGTATATAGCCAGTTGACCCAAGTATCCAATGAAGCAGATGAGAAGGAAATTTTACAAAGCAACCAAGAGGACTTAGTATCAATTGACATTGCTAAAAGAAATGGTAGCCCACCCTCCAGCAAAGGTGACATGGCTGAGTTGGATGACAAAGATCACACTGAAGCTTGTTCGAGTAAACAAAATGATAAACTCCCCATTTCGAGTGATGAAGAGAGTGAAAATGAGCAACCTGGTAAATCAACTCCTTTACATCAAGCAGCACAATCTGGTGACTCTCAAAAGATTATGGAACTCCTGGAACAGGGCTTGGATCCTTGCATCAAAGATGAAAGGGGACGGACCCCATATATGTTGGCAAATGAAAAGGAAGTCAGGAATACATTCAGAAGGTTTATGGCGTCAAACCCTGACAAATGGGATTGGAATGCTGCAAAAGTGCCTAGTGCATTGACTAAAGATATGGAAGAATCACAAGCTGCTAAGCAGGCAGAAAAAGATGCTAAGAGGAAAGCTAGAGCAAAAGAATTAAAGAAATTGCGTAAAGCAAAAGAAAAGAAGGCTCAGGCTGAAGCTGCCTTGCCTAAGAATGATTCCAAAACTGGAGAAAAGCAAGTGACTGCTCAAGCATCTACTAAGGGACAATCCCAACCAAAAAGTGGTGTGCAATTATCTAAAGAGGAGGAAATAAGAGCATCTCAGGCTGCAGAAAGAGAAAAGAGAGCAGCTGCTGCAGAGAGAAGAATAGCTGCACTCAAAATTCAAGTTAATAGTGGAACTGCTGCACCTAGCAATTCAGAGCCTAAAAGTGGATTAGCCAGTGACATTTACTGTTCCTGTTGTAATTCATCACTTGCTGGTAAAGTTCCCTTCCACCGGTATAATTACAAATACTGCAGCACATCATGCATGCATGTACACAGGGAGATCCTAGAGGATGGATGA | 1995 | 0.4231 | MAANIPATSSSMTTSFHQKRHRSIFEVPPNFFDSCRLLPSLHSPVSENHNEGLKTIEPPSNDVVVDDAPPNAVVSATRLTCNTCKAQFDSLQDQRSHFKSDIHRFNVKLTIAGKNIVKEEDFEVLTSESVKDYDVSSISGSESDDDSDIESQSQKEVRDKSSESLKQKLLICLQTGQRVSVWKCLIMNMTENVSYEDEKLKNEVIERLKSLTIEPRDKTHLRVVLLASGGHFVGCVFDGDAVVTHKTFHRYVVRAKAGKKQSSKDASGRAAHSAGASLRRYNELALKKEVHDLLIAWRPYFDACNCIFINAPSSSRQLLYDGERPYFTNRQCAIRNIALTVRRPTFREAKRVYSQLTQVSNEADEKEILQSNQEDLVSIDIAKRNGSPPSSKGDMAELDDKDHTEACSSKQNDKLPISSDEESENEQPGKSTPLHQAAQSGDSQKIMELLEQGLDPCIKDERGRTPYMLANEKEVRNTFRRFMASNPDKWDWNAAKVPSALTKDMEESQAAKQAEKDAKRKARAKELKKLRKAKEKKAQAEAALPKNDSKTGEKQVTAQASTKGQSQPKSGVQLSKEEEIRASQAAEREKRAAAAERRIAALKIQVNSGTAAPSNSEPKSGLASDIYCSCCNSSLAGKVPFHRYNYKYCSTSCMHVHREILEDG | 664 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi3943g00022 | 664 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 81 | 103 | IPR013087 | - | |
Gabi3943g00022 | 664 | MobiDBLite | consensus disorder prediction | 508 | 522 | - | - | |
Gabi3943g00022 | 664 | Pfam | Bacteroidetes VLRF1 release factor | 223 | 360 | IPR041175 | - | |
Gabi3943g00022 | 664 | ProSiteProfiles | Ankyrin repeat region circular profile. | 429 | 461 | - | - | |
Gabi3943g00022 | 664 | MobiDBLite | consensus disorder prediction | 501 | 595 | - | - | |
Gabi3943g00022 | 664 | MobiDBLite | consensus disorder prediction | 135 | 160 | - | - | |
Gabi3943g00022 | 664 | ProSiteProfiles | Ankyrin repeat profile. | 429 | 461 | IPR002110 | GO:0005515 | |
Gabi3943g00022 | 664 | Coils | Coil | 576 | 605 | - | - | |
Gabi3943g00022 | 664 | MobiDBLite | consensus disorder prediction | 550 | 573 | - | - | |
Gabi3943g00022 | 664 | SUPERFAMILY | Ankyrin repeat | 431 | 486 | IPR036770 | - | |
Gabi3943g00022 | 664 | MobiDBLite | consensus disorder prediction | 394 | 428 | - | - | |
Gabi3943g00022 | 664 | Pfam | Vms1-associating treble clef domain | 627 | 659 | IPR041540 | - | |
Gabi3943g00022 | 664 | MobiDBLite | consensus disorder prediction | 379 | 441 | - | - | |
Gabi3943g00022 | 664 | MobiDBLite | consensus disorder prediction | 574 | 595 | - | - | |
Gabi3943g00022 | 664 | Gene3D | - | 412 | 542 | IPR036770 | - | |
Gabi3943g00022 | 664 | PANTHER | ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 | 17 | 663 | IPR047139 | - | |
Gabi3943g00022 | 664 | Coils | Coil | 505 | 543 | - | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi3943g00022 | 19 | 611 | C2H2 Transcription Factor Family | AT1G01930 | 52.545 | 0.0 | 564 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi3943g00022 | K26089 | - | gmx:100527709 | 950.658 |