Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi393g00003 ATGTTTTCTACTTTGCGCCATCTCTGTACAAGCACCGGCACCAGCACCAGCACCAGCACCACCTCAAGAATCCCTTGGAGGTATAAGAAGCTTGCTGTGACACAAGCACAGCATGCCCTCACTGATTACCTTCATGCCACAAGGAGCATCCCTTATCCCTATGCTGACCAGATTGCAAAGAATTCCCTTCTCTCTCTCACCAATCTCATTTCAAAGGTCCCTTTTTCACCTTCAAATTTCTCCCAGAACCTTGACAAGTTCCTCAGGTACAACCCCATCAATGAATTTGAGTTTTTCTTTGAAAGCATTGGCATACATTATACTCAACTTCATGCTTTGTTGCCTCCCAACAAGTTCTTCTTTTCTGAAGATGGGTCCCTTCTGGATGCTGCTTGTGCTCTCTCTGAATTTGGGTTTCCCTGGGATAAGCTTGGGGTGTTGTATATGGAGAGTGGTTCCGTATTTAAAAGGAGTGCTTTAGAGTTGAAGGGTAGGCTTTGTTTGTTCAAAAGATATGGTTTTTGTAATGCACAAGTCACTGGGATATGTTTGGCTTTCCCTTTTGTTTTTTGTGAGGAGGAAGGCCAATTGGGTGCTCTGATTGATGGGTTGTTTTCTGATCTGAAAGTGGCTTTTTGGGATTTTGATTTGGCAGGTTCTGTTGAGGGGAATGTGGAGGCTTGGCATGAGGTGTGTAGGAAAATTAGGGTGTTTTACAAATTGAATGGTGACAAGGTTTTTAAGATAGGGGATCTCATTGGAAGGAATAAAAGTGTCATTCTTGAGCATGGAGAAGAGGAGTTGATTCAAAAGGTTGAGTATTTTTGTAGTTTTGGTGTCAAGAAGGAGGAAGTGGCACGGTTTATTCTCGAGGGCTCAGAATTGTTGAATCTTGATTTGGAAACGTCGGTGATTAATGTATTGAAGCTATTGAAACACCTTGGAATGAGTTCCAAAGATATTGAGGATGTCAAGAGGGATTATGCTCATGTGTTGGGAACAATAAAAATGGCTAATCTTCCTAATGTAATGAGGGCTTTGGGTTTACGGGAGTGGTTCTTTAATAAAATCAAAGATGGGAATCATCATTTGTTAGTGGGTTATATCACAAGCTATCCCAATGAACCCCAAGATAAATATTATCTTGGTGGTTTAGAGGCAGTTAGTGTTTCAAGAACCCCAGTTCACAATATGAATAAATTGAATTTCTTGCATGCATTGGGCTTTGGAGAAAATGCTTTGACCATGAATATCTTAACCGACTTGCATGGAACAAGTAGCGAGTTGCAAAAAAGATTTGATTGCCTTCTACATTCAGATTCTTAA 1326 0.4087 MFSTLRHLCTSTGTSTSTSTTSRIPWRYKKLAVTQAQHALTDYLHATRSIPYPYADQIAKNSLLSLTNLISKVPFSPSNFSQNLDKFLRYNPINEFEFFFESIGIHYTQLHALLPPNKFFFSEDGSLLDAACALSEFGFPWDKLGVLYMESGSVFKRSALELKGRLCLFKRYGFCNAQVTGICLAFPFVFCEEEGQLGALIDGLFSDLKVAFWDFDLAGSVEGNVEAWHEVCRKIRVFYKLNGDKVFKIGDLIGRNKSVILEHGEEELIQKVEYFCSFGVKKEEVARFILEGSELLNLDLETSVINVLKLLKHLGMSSKDIEDVKRDYAHVLGTIKMANLPNVMRALGLREWFFNKIKDGNHHLLVGYITSYPNEPQDKYYLGGLEAVSVSRTPVHNMNKLNFLHALGFGENALTMNILTDLHGTSSELQKRFDCLLHSDS 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi393g00003 441 Gene3D Transcription termination factor 3, mitochondrial 61 212 IPR038538 -
Gabi393g00003 441 Gene3D Transcription termination factor 3, mitochondrial 245 440 IPR038538 -
Gabi393g00003 441 PANTHER CGI-12 PROTEIN-RELATED 40 407 IPR003690 GO:0003690|GO:0006355
Gabi393g00003 441 Pfam mTERF 245 333 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi393g00003 Gabi-Chr393 102220 106025 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gabi393g00003 mTERF 1.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi393g00003 - - gsj:114418754 565.844