Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3937g00002 ATGGCTTGGAGTTGGAGATGTAGCTGTGTGGTTTCAGTTGCTGTAATGCTTCTGCCACTTATGGCTTCTGCGGGTTCTATTGTCAAGAACCTACCGGGCTATAATGGTGACCTTCCATTCAAGCTTGAAACTGGATACATAGGAGTGGGAGAAGGAGAAGAGGTCCAAATATTTTACTTATTTGTGGAGTCTCAAAGAAATCCTTTCATTGATCCACTTTTACTTTGGTTCGTTGGAGGTCCAGGCTGCTCTGGCCTTTCTGCATTTTTTTTCGAAAATGGGCCATTAGTAATGGATCGCAATTATAGTGGGAACCTTCCAAACCTTGAATTGAACCCATATGCATGGACAGATATGTTGAATATGATATACATAGATATGCCAGTGGGCACTGGATTTTCTTACTCAGAAACGCAAGAAGGCTACTATAGCAGTGACATACTGTGGGTGGAACATACATATACATTTTTACTAAAGTGGTTTATCGATCATCCAAAGTTTAGCTCAAATCCATTTTACATTGGTGGTGGCTCATATTCAGGATTAACAACTGGTCCTCTTGTTCAAAAAGTATATGAAGGTTACAAAGCAAGAAGCGTGCCACTCATCAACATCAAAGGTTATGTGATCGCAAGCCCATGCGTTGACGTGTATCACGACACGAACATGAAAGTTTTATTTGCATACCATATGGGTCTTATACCAGAAGAACTCTATGAGTCGATGAAAGAAAATTGTAACGGCGATTATGTAAACATTGATCCGGAAAACACAAAGTGCGTCTCAGATCATGAAGCTTATTCCGAGCTAGTTCGTTATATAAACGAGCAACAAATTACGGAACCTCTTTGTGTTACTACGCCTGGTATGAACCAAGCAATTATTCAATCAGTTCAAGATCGTTCAGCATTCTGGTGTAGAAGTTATGATCACATCCTTATTGACACATGGGCAAATGACGAAAATGTGTGGAAGGCACTTCATGTAAGAGAGGGAACTAAGAAGGAGTTCTTGAGATGCAACAGGACTTTGGCATACAAGACAACTATACGCAGCGTTGTAGAGTATTATCGGAATCTCACTAATGCCAACATCGAAGCTCTTGTTTACAGTTCTGCTCTTGACATGTCTATACCACACCTGAGTACAGAATATTGGATAAAGTCATTCAACATGAGCATACGTGACAAATGGCGTGCATGGTTTGTTGATGGTCAAGTTGCCGGATTCACAGAAATCTACAAAATGAAAGAAGACCACTACCTAACATACGTGACCGTGAAGGGCGCTGGACACGTGGCCCAAACATTTAAACCCAGGGAAGTTTATAATATGATCAATAGGTGGTTCTCATTTTCGCTTATCTAA 1368 0.4064 MAWSWRCSCVVSVAVMLLPLMASAGSIVKNLPGYNGDLPFKLETGYIGVGEGEEVQIFYLFVESQRNPFIDPLLLWFVGGPGCSGLSAFFFENGPLVMDRNYSGNLPNLELNPYAWTDMLNMIYIDMPVGTGFSYSETQEGYYSSDILWVEHTYTFLLKWFIDHPKFSSNPFYIGGGSYSGLTTGPLVQKVYEGYKARSVPLINIKGYVIASPCVDVYHDTNMKVLFAYHMGLIPEELYESMKENCNGDYVNIDPENTKCVSDHEAYSELVRYINEQQITEPLCVTTPGMNQAIIQSVQDRSAFWCRSYDHILIDTWANDENVWKALHVREGTKKEFLRCNRTLAYKTTIRSVVEYYRNLTNANIEALVYSSALDMSIPHLSTEYWIKSFNMSIRDKWRAWFVDGQVAGFTEIYKMKEDHYLTYVTVKGAGHVAQTFKPREVYNMINRWFSFSLI 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3937g00002 455 Gene3D - 306 453 - -
Gabi3937g00002 455 Pfam Serine carboxypeptidase 32 451 IPR001563 GO:0004185|GO:0006508
Gabi3937g00002 455 Gene3D alpha/beta hydrolase 22 294 IPR029058 -
Gabi3937g00002 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
Gabi3937g00002 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
Gabi3937g00002 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Gabi3937g00002 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 422 435 IPR001563 GO:0004185|GO:0006508
Gabi3937g00002 455 FunFam Serine carboxypeptidase-like 19 21 289 - -
Gabi3937g00002 455 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 27 439 IPR001563 GO:0004185|GO:0006508
Gabi3937g00002 455 FunFam Carboxypeptidase 305 453 - -
Gabi3937g00002 455 SUPERFAMILY alpha/beta-Hydrolases 28 451 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3937g00002 Gabi-Chr3937 25890 40137 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3937g00002 22 51 Calmodulin-binding Proteins AT2G22960 66.667 2.61e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3937g00002 K16296 - gmx:100798023 509.99