Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3921g00048 ATGGATATGGTTTCTCCTAATAGGGATGAGGGGTCACAGTATCCAACTCTGGTTAGGGAAGGCTCTTTCTATAACCTCACATTTGATGAGGGAAACAAAAGGAAGCCTCTCCATAGTATGAATTTGGATGAGCTTCTCAGAAATGTGATCTCAGCAGAAAATGGATCACAACTCGTGACAAACCATGATTCATTTCTTCTTGGGAACATTAATTTGAACGGGACATTGACTAATAAAACCATTAATGAGGTATGTAGGGAGATTGTTCAACGAGAACATGTCAAGGAAAACCACTCCCAACAACAATCTAGTTTTGGAGAAATGACATTGGAAGATTTTCTAGGTGGTGATGGAATGATTAACATAGGAAAGGAGGATAATGTTATTGGTCATGATGTTCAAACCCTGAAGGGAATTGACCCAATGGTCATAGGGTCACAGCCAGAAGATTGGTTGCCACTGCAGATGCAAACTTACCAACATCAACATCAACATCAACAGCAACATCATGAGAAGCAGCATCAACAAATAATGGGACTATGTCCAGATTTTGGTGTTTCTAAATATGAGAACCCGGAAATTGGTTACACAGTGCCAATAACATGTTCAGATTCCAAGAAGCGAAGCAGGTACTCAGATGAGATGCTGGAAAAGACTATTGAGAGGAGACAGAAGAGAATGGCCAAGAACAGGGAATCTGCTGCTAGATCAAGGGCAAAGAAGCAGGAACATATAAATAAGCTAGAGAACGAGAAGTTTCGCTTGCAGAAGGAAATTAGCCTGCTCAAAACGGTGAAGGGACAAAGGCAAGATGGGGCTGGCGGCCATGTGGCCCAAGGTTCAAAACAGTTCATGCTCGTCCTTTGA 867 0.4198 MDMVSPNRDEGSQYPTLVREGSFYNLTFDEGNKRKPLHSMNLDELLRNVISAENGSQLVTNHDSFLLGNINLNGTLTNKTINEVCREIVQREHVKENHSQQQSSFGEMTLEDFLGGDGMINIGKEDNVIGHDVQTLKGIDPMVIGSQPEDWLPLQMQTYQHQHQHQQQHHEKQHQQIMGLCPDFGVSKYENPEIGYTVPITCSDSKKRSRYSDEMLEKTIERRQKRMAKNRESAARSRAKKQEHINKLENEKFRLQKEISLLKTVKGQRQDGAGGHVAQGSKQFMLVL 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3921g00048 288 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 225 240 IPR004827 GO:0003700|GO:0006355
Gabi3921g00048 288 Coils Coil 231 265 - -
Gabi3921g00048 288 Gene3D - 220 271 - -
Gabi3921g00048 288 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 19 264 IPR043452 GO:0003700|GO:0045893
Gabi3921g00048 288 SMART brlzneu 218 282 IPR004827 GO:0003700|GO:0006355
Gabi3921g00048 288 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 220 264 IPR004827 GO:0003700|GO:0006355
Gabi3921g00048 288 Pfam bZIP transcription factor 222 262 IPR004827 GO:0003700|GO:0006355
Gabi3921g00048 288 SUPERFAMILY Leucine zipper domain 222 266 IPR046347 GO:0003700|GO:0006355
Gabi3921g00048 288 CDD bZIP_plant_BZIP46 222 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3921g00048 Gabi-Chr3921 663328 665406 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3921g00048 16 266 bZIP Transcription Factor Family AT2G41070 34.457 2.56e-27 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi3921g00048 bZIP_1 2.6e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3921g00048 K14432 - qsa:O6P43_019692 224.172