Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3921g00039 ATGGATGTGGTTTCTCCTAATAGGGATGAGGGGTCACAGTATCCAACTCTGGTTAGGGAAGGCTCTTTCTATAACCTCACATTTGATGAGGGAAACAAAAGGAAGCCTCTCCATAGTATGAATTTGGATGAGCTTCTCAGAAATGTGATCTCAGCAGAAAATGGATCACAACTCGTGACAAACCATGATTCATTTCTTCTTGGAAACATTAATTTGAATGGGACATTGACTAATAAAACCATTAATGAGGTATGTAGGGAGATTGTTCAACAAGAACATGTCAAGGAAAACCACTCCCCTCAACAATCTAGTTTTGGAGAAATGACATTGGAAGATTTTCTAGGTCGTGATGGAATGATTAACATAGGAAAGGAGGATAATGTTATTGGTGATGTTCAAACCCTGATGGGAATTGACCCAATGGTCATAGGGTCACAGCCAGAAGATTGGTTGCCATTGCAGATGCAAACGTACCAACATCAACATCAACAGCAACAGCAACATCATGAGAAGCATCAACAACAAATAATGGGACTATGTCCAGATTTTGGTGTTTCTAAATATGAGAACACGGAAATTGGTTACACAGTGCCAATAACATGTTCAGATTCCAAGAAACGCAGCAGGTACTCAGATGAGATGCTGGAAAAGACTATTGAAAGGAGACAGAAGAGAATGGCCAAGAACAGGGAATCTGCTGCTAGATCAAGGGCAAAGAAGCAGGAACATATAAATAAGCTAGAGAACGAGAAGTTTCGCTTGCAGAAGGAAATTAGCCTGCTCAAAACGGTGAAGGGACAAAGGCAAGATGGGGCTGGCGGCCATGTGGCCCAAGGTTCAAAACAGTTCATGCTCGTCCTTTGA 864 0.4167 MDVVSPNRDEGSQYPTLVREGSFYNLTFDEGNKRKPLHSMNLDELLRNVISAENGSQLVTNHDSFLLGNINLNGTLTNKTINEVCREIVQQEHVKENHSPQQSSFGEMTLEDFLGRDGMINIGKEDNVIGDVQTLMGIDPMVIGSQPEDWLPLQMQTYQHQHQQQQQHHEKHQQQIMGLCPDFGVSKYENTEIGYTVPITCSDSKKRSRYSDEMLEKTIERRQKRMAKNRESAARSRAKKQEHINKLENEKFRLQKEISLLKTVKGQRQDGAGGHVAQGSKQFMLVL 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3921g00039 287 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 19 263 IPR043452 GO:0003700|GO:0045893
Gabi3921g00039 287 Pfam bZIP transcription factor 221 261 IPR004827 GO:0003700|GO:0006355
Gabi3921g00039 287 Coils Coil 155 175 - -
Gabi3921g00039 287 CDD bZIP_plant_BZIP46 221 267 - -
Gabi3921g00039 287 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 224 239 IPR004827 GO:0003700|GO:0006355
Gabi3921g00039 287 SMART brlzneu 217 281 IPR004827 GO:0003700|GO:0006355
Gabi3921g00039 287 SUPERFAMILY Leucine zipper domain 221 265 IPR046347 GO:0003700|GO:0006355
Gabi3921g00039 287 Gene3D - 219 270 - -
Gabi3921g00039 287 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 219 263 IPR004827 GO:0003700|GO:0006355
Gabi3921g00039 287 Coils Coil 230 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3921g00039 Gabi-Chr3921 559347 561622 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3921g00039 16 265 bZIP Transcription Factor Family AT2G41070 35.849 4.64e-29 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi3921g00039 bZIP_1 2.6e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3921g00039 K14432 - qsa:O6P43_019692 226.483