Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3921g00037 ATGAGCTCTTCATCAACTCAACTAGTCATTACGAAAAGGATGGGCATATATGAGCCATTCCATCATGTTAGCATGTGGGGAGATAGCTTCAAAGTTGATGGCAGCCTGAATTCAATTGCTTCCCCAATGTTAATGGTGAACACTAGCATGGAGAACAAGGTCAGAACGCATGAATGTATTCCTCATGAATCAAGGGAAACTTCAGGAGATGATGATCAAGAGACTAATGACAAAGTTGTTAGTAAGGTGCTAAGACGTCTAGCTCAAAATCGTGAGGCTGCTCGGAAATGTCGGATGCGGAAGAAGGCTTATGTTCAACAATTAGAAACAAGTCGTTTGAAGCTCATGCAAGTGGAGCTGGAGATTGAGAAAGCAAGAAAACAGAGTCTATACCTAGGCAGTGCATTAGATGTCAGTTATATGGGATCTTCTGGAACCATAAACTCAGGAATGGCTGTGTTTGAAATTGAATATGGACAATGGGTTGAAGAGCAGAATAGACAGAATGAAGAAATAAGAAATGCATTGCAAAAACATGCATCTGATATACAACTTCATCTACTTGTTGACCGTAGCTTGAACCACTACTCAAATCTTTTCAGGATGAAAATAGATGTTGCAAAGGCTGATATTTTTTATTTAATCTCTGGTGCGTGGAAAGCATCAATAGAACGCCTTTCTCTTTGGATTGGAGGATCACGCCTTTCACAGCTTCTAAATATCATAGTACCACAGCTTGAGCTTTTGACTGATGAACAAATTGTTAGCATTAATAGCCTCCGACTATCATCTCAGCAAGCTGAAGATGCTCTTTCACTAGGATTGGATAAACTCCAGCAGAGTCTAGTCAACAACATAGCATCTGATCCATTGGTTGTAGGAAACTACGAGTTTCTGATGGCTATTGCCATGGACAAAAGTGAAGCACTAGAAAGTTTTGTAAACCAGATCACCTTAGGCAACAAACTCTGCTACACATGTCTCGTATTCTGA 993 0.4018 MSSSSTQLVITKRMGIYEPFHHVSMWGDSFKVDGSLNSIASPMLMVNTSMENKVRTHECIPHESRETSGDDDQETNDKVVSKVLRRLAQNREAARKCRMRKKAYVQQLETSRLKLMQVELEIEKARKQSLYLGSALDVSYMGSSGTINSGMAVFEIEYGQWVEEQNRQNEEIRNALQKHASDIQLHLLVDRSLNHYSNLFRMKIDVAKADIFYLISGAWKASIERLSLWIGGSRLSQLLNIIVPQLELLTDEQIVSINSLRLSSQQAEDALSLGLDKLQQSLVNNIASDPLVVGNYEFLMAIAMDKSEALESFVNQITLGNKLCYTCLVF 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3921g00037 330 ProSiteProfiles DOG1 domain profile. 151 330 IPR025422 GO:0006351|GO:0043565
Gabi3921g00037 330 PANTHER TRANSCRIPTION FACTOR TGA9 2 316 - -
Gabi3921g00037 330 Pfam Seed dormancy control 170 243 IPR025422 GO:0006351|GO:0043565
Gabi3921g00037 330 Coils Coil 162 182 - -
Gabi3921g00037 330 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 85 100 IPR004827 GO:0003700|GO:0006355
Gabi3921g00037 330 Pfam bZIP transcription factor 82 111 IPR004827 GO:0003700|GO:0006355
Gabi3921g00037 330 SMART brlzneu 78 138 IPR004827 GO:0003700|GO:0006355
Gabi3921g00037 330 FunFam BZIP family transcription factor 81 130 - -
Gabi3921g00037 330 Coils Coil 108 128 - -
Gabi3921g00037 330 Gene3D - 81 135 - -
Gabi3921g00037 330 SUPERFAMILY Leucine zipper domain 82 116 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3921g00037 Gabi-Chr3921 532731 535930 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3921g00037 1 316 Calmodulin-binding Proteins AT5G65210 49.062 1.26e-105 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi3921g00037 DOG1 1.1e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3921g00037 K14431 - gmx:100775882 469.929