Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3921g00024 ATGTGCTCAGCTGCAGAAGACAAGGAGGTAGTTTCAGTATTAGAAGACTGGGGAGGGCAGGAACTCGATGGACTTTCACCTTGCATGGTCGATACACAGGGGATGAAAGATCCACTTTTGGACTCCGATTCCAATATTTTCTATATGAATGTGGAGCCTAACATCACTTCGGACAAAATATTGGTAACAGATTCTATCCTACCAGTTGATATGCCACAATCTTCTAATGTTGATGCAGTTATTGTTGAACCTTATGTTGGAATGGAATTTGAATCATTTAAAAGAGTTGAACATTTTTATACATTATTTGCTAAAGCAAAGGGGTTTGGGATCCGTATTCGCTCTAGTAAAAAAAATTACGGACTTTTTGTATGTTGTAAGCACGGTGAAAATAGCAAGAAAGGCTGTAACATGGGAGATGCTAAGAAAAAGTCTTCAACTATTCGCTCGGGATGTAAAGCATCACTTTCTGTGACAAAGGAAAAGAATCGAGACATATGGGTTATCAAATCTTTTGACAACAATCATAATCATATCATGGCTAGTCCTAAGAGTGTGTCTTATTTGAGGTGTCATAAAAAAATGAATGGTGCTGCAAGAAGACTTGTTGAACAGTTTAATGAAGAAGGTTTGCCTACCGGAAAGGTTGCTGCAATGTTTAATGGCAGCGATTTAGCTTTTTCTAATCGGGATTGTTGGAATCATTTGAGAAATCTTCGAAGGAAGAATTTGGATGTTGGAGATGCATTAGCTGTTTTTAATTACTGCAAACAAAAGCAAGCTCAAAATTCTGATTTTTTCTATTCAATACAATGTGATGCTGATGATAGAATGATAAACTTCTTTTGGGTGGATGCTAGATCAAGGTACGCTTATCAACAGTTTGGAGATGTAATTACTTTTGATACCACATATAGAACCAACAAATATAGCATGCCGTTTGCCCCATTTACTGGATTAAACCATCATCTTCAATCAATTTTATTTGGTTGTGCCTTATTACAAGATGAAACCGAGAAATCTTTTACATGGTTATTTGAAACTTGGCTTGAGGCAATGAATGGAAAAAAGCCAGTTTCTATAATAACTGATCAAGATTTAGCTATTGGAGCTGCTGTGGCCAAGGTATTTCCAGAAACTCGTCATCGTTTGTGCTTGTGGCACATTAGAAAGAAGTTTCCTGAAAAGCTTGCACACATATATCACAAGAATTCTACATTCAAGCGTGAGCTGAAAAGGTGTATTCGAGAATCACCAACCATCAAAGAATTTGAAAATGAATGGAAAAATATAATGGTTACATACGATTTGCAGAAAAATGTATGGCTTCAAAGATTATTTGAAATTAGAGAGTCGTGGATACCGGTATATAATAGAAGCATATTTTTTGCCGGTATGAATACTACGCAAAGAAGTGAGAGCATCAATTCTTTTTTTGACTCCTTTGTTAATGCAACCACAACACTGCGAGACTTTGTAGTAAAATTTGAGAAGGCAATCAACAACCGCTATGAGGCTGAAAAAAGAGAGGACTTTGAGTCCAGACATAAATCACGCAGTTTGAGTATTGGCTCAAAAATTGAAGAGCACGCTGCGTCAATCTATACCAGAAATGTGTTTCGTAAGTTTCAGAATGAGCTTATTAGAGTCAACCATTTTATAAAGGAGAAGATTGAGAAAAATGGTTCACAATGTAAGTATCAAATTTCTAATTGTTTCGATACTCGGGATAACTTCATTGTTGATATAAATTTAGAGTCAAAGGATGCTTCATGTGGCTGTCAACTTTTTGAATTTATGGGAATCATATGTAGACACATATTGGTAATCTTTCAAGCAAAAAATATTATTCAAATTCCTAGCCACTATATCATGCAACGTTGGACTAAAGAAGCCAATAAATGCATTGAGGCAGACGATATTGATATCTCAAATCATGATTCAGACATTTTGAGAAGTTTGCATGTGCAACGTCAATTTAGCAGACTTTCTGATTTGGCTAAAAGATCAGAATATGCGTACAAGTATATTGTGACAGAACTTGATCGTATTTATGACGTGGCCAGCACTATGAAGACAAAAATGCTTGATGTCAATGAAGCTCCTATAGAGTCTAGTCAGCAAAATTTGATATGTGACATAGCATATGATGATTCAAATTTCAATATCAAGGATCCATACATATCACAAACAAAAGGTAGAAAAAGGAAGGATTCTGACAAATAG 2226 0.3571 MCSAAEDKEVVSVLEDWGGQELDGLSPCMVDTQGMKDPLLDSDSNIFYMNVEPNITSDKILVTDSILPVDMPQSSNVDAVIVEPYVGMEFESFKRVEHFYTLFAKAKGFGIRIRSSKKNYGLFVCCKHGENSKKGCNMGDAKKKSSTIRSGCKASLSVTKEKNRDIWVIKSFDNNHNHIMASPKSVSYLRCHKKMNGAARRLVEQFNEEGLPTGKVAAMFNGSDLAFSNRDCWNHLRNLRRKNLDVGDALAVFNYCKQKQAQNSDFFYSIQCDADDRMINFFWVDARSRYAYQQFGDVITFDTTYRTNKYSMPFAPFTGLNHHLQSILFGCALLQDETEKSFTWLFETWLEAMNGKKPVSIITDQDLAIGAAVAKVFPETRHRLCLWHIRKKFPEKLAHIYHKNSTFKRELKRCIRESPTIKEFENEWKNIMVTYDLQKNVWLQRLFEIRESWIPVYNRSIFFAGMNTTQRSESINSFFDSFVNATTTLRDFVVKFEKAINNRYEAEKREDFESRHKSRSLSIGSKIEEHAASIYTRNVFRKFQNELIRVNHFIKEKIEKNGSQCKYQISNCFDTRDNFIVDINLESKDASCGCQLFEFMGIICRHILVIFQAKNIIQIPSHYIMQRWTKEANKCIEADDIDISNHDSDILRSLHVQRQFSRLSDLAKRSEYAYKYIVTELDRIYDVASTMKTKMLDVNEAPIESSQQNLICDIAYDDSNFNIKDPYISQTKGRKRKDSDK 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3921g00024 741 ProSiteProfiles Zinc finger SWIM-type profile. 579 615 IPR007527 GO:0008270
Gabi3921g00024 741 Pfam MULE transposase domain 298 392 IPR018289 -
Gabi3921g00024 741 Pfam SWIM zinc finger 581 615 IPR007527 GO:0008270
Gabi3921g00024 741 Pfam FAR1 DNA-binding domain 98 180 IPR004330 -
Gabi3921g00024 741 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 77 682 IPR031052 GO:0006355
Gabi3921g00024 741 SMART 26again6 590 617 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3921g00024 Gabi-Chr3921 365067 368110 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi3921g00024 MULE 1.8e-31 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3921g00024 - - vvo:131633311 990.719