Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3921g00017 ATGGTTGATTTGGAAATTCAGGTTCCCACCCCTTTTGACCCATTTGCTGAGGCTATAGAATCGGATGCACCGGGGGCCAAAGAGTATGTGCATATACGAATTCAACAAAGGAATGGAAAAAAGAGCTTAACCACTGTGCAAGGGCTGAAGAAGGAGTTCAGCTACGAGAAGATATTGAAGGACCTCAAGAAAGAGTTCTGTTGCAACGGGAATGTTGTTCAGGACAAGGAGCTTGGCAAGATAATCCAACTCCAAGGTGATCAGCGCAAGAACGTTTCTCAGTTCCTTGTACAGGCTGGCCTTGTTAGGAAGGACCAGATCAAGATTCATGGTTTTTGA 339 0.4513 MVDLEIQVPTPFDPFAEAIESDAPGAKEYVHIRIQQRNGKKSLTTVQGLKKEFSYEKILKDLKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVRKDQIKIHGF 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3921g00017 112 ProSiteProfiles Translation initiation factor SUI1 family profile. 30 100 IPR001950 GO:0003743|GO:0006413
Gabi3921g00017 112 NCBIfam translation initiation factor SUI1 5 112 IPR005874 GO:0003743
Gabi3921g00017 112 Pfam Translation initiation factor SUI1 27 100 IPR001950 GO:0003743|GO:0006413
Gabi3921g00017 112 CDD eIF1_SUI1 28 111 IPR005874 GO:0003743
Gabi3921g00017 112 Gene3D - 1 112 - -
Gabi3921g00017 112 SUPERFAMILY eIF1-like 3 112 IPR036877 GO:0003743|GO:0006413
Gabi3921g00017 112 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 8 112 - -
Gabi3921g00017 112 FunFam Eukaryotic translation initiation factor SUI1 2 112 - -
Gabi3921g00017 112 PIRSF Transl_init_SUI1_Euk 1 112 IPR005874 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3921g00017 Gabi-Chr3921 292538 293874 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3921g00017 1 112 Eukaryotic Initiation Factors Gene Family AT5G54940 83.929 8.49e-69 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3921g00017 K03113 - gmx:100791423 219.164