Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3921g00015 ATGCCCTCAGCTCAGGATCCGTTTTACGTTGTCAAGGCTGAGATTCAAGGATCTATTGATAAATTGCAATCTACTTTACACCAATGGGAATACACTTCGGATGCTGAAGAGCGAGTACATCTTACAAAGGAGGTTCTTGCTGGATGCGAAAGCATAGAGTGGCAGGTCGATGAGTTGGACAAAGCAATCGCTGTGGCATCTAGAGATCCTTCTTGGTATGGCATTGATGAAATGGAGCTTGAAAGCCGGAGGAAATGGACAAGCAGTGCTCGTACTCAGGTTGGCACAGTGAAGAAAGCAGTGGAAGCTGGAAAGGGCTCAAGTTCAACAAGCCATGCTAGTGCAAATGGGATGCACCGAGAACTAATGAGACTACCAAATTCCCATCAAAATGATACATCCAGGCAGTATGCTGCCCATGATAATGATGATTTCATACAATCAGAATCAGATAGACAGATGCTTCTTATAAAGAAACAGGATGAGGAGTTGGATGAGCTTACTGTAAGTGTGCAAAGAATTGGGGGTGTTGGACTTACAATACATGAAGAACTCCTTGGACAGGAAAGGATTATAGATGATTTGGGTGCTGAGATGGAAAGTACATCGAATCGTCTAGATTTTGTCCAAGTGAGTTTCTGCATCTAG 648 0.4352 MPSAQDPFYVVKAEIQGSIDKLQSTLHQWEYTSDAEERVHLTKEVLAGCESIEWQVDELDKAIAVASRDPSWYGIDEMELESRRKWTSSARTQVGTVKKAVEAGKGSSSTSHASANGMHRELMRLPNSHQNDTSRQYAAHDNDDFIQSESDRQMLLIKKQDEELDELTVSVQRIGGVGLTIHEELLGQERIIDDLGAEMESTSNRLDFVQVSFCI 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3921g00015 215 CDD SNARE_NTD_AtSYP61-like 5 102 - -
Gabi3921g00015 215 Gene3D - 156 213 - -
Gabi3921g00015 215 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 154 207 IPR000727 -
Gabi3921g00015 215 SUPERFAMILY t-snare proteins 5 101 IPR010989 GO:0016020|GO:0016192
Gabi3921g00015 215 MobiDBLite consensus disorder prediction 97 116 - -
Gabi3921g00015 215 Gene3D - 2 104 - -
Gabi3921g00015 215 FunFam Syntaxin 10 3 104 - -
Gabi3921g00015 215 CDD SNARE_Qc 157 210 - -
Gabi3921g00015 215 Pfam Syntaxin 6, N-terminal 6 98 IPR015260 GO:0016020|GO:0048193
Gabi3921g00015 215 SUPERFAMILY SNARE fusion complex 152 210 - -
Gabi3921g00015 215 FunFam syntaxin-61 isoform X1 157 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3921g00015 Gabi-Chr3921 259396 263353 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3921g00015 55 210 SNARE and Associated Proteins AT1G28490 68.590 1.09e-71 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3921g00015 K08500 - gmx:100787129 351.673