Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3921g00011 ATGTTTTCCTTCACTCTCACGAATGGGGTTCCTTCAAAACCTCACCTTTCTCATTCCCTTTCTTCCTCTTCCCAATTTCACCAAACCCGGTTCCTTCACTCTCCATCGAAGAACCACTCTTCGATTCGCTGCGGCATCCGCGAACTCCGAGAGCGAATCAACACGGTGAAGAACACCCAAAAGATCACCGAAGCGATGAAGCTCGTCGCCGCCGCCAGGGTCCGGCGAGCACAAGAAGCGGTGGTCAACGGAAGACCCTTCTCGGAGAAACTGGTTGAAGTGTTGCACGACATCAACGAAAGGCTCCGAAACGAGGACGTTGATGTTCCTTTGACTAACGTTAGACCTGTTAAGAAGGTTGCCCTTGTTGTCATCACAGGGGATCGTGGCCTCTGTGGTGGTTTCAACAATGCAGTGGTGAAAAAAGCTGAGACCCGAATTGAGGAGTTGAAGAAGCTTGGTTTGGATTGCGTTGTGATCAGTGTTGGGAAAAAGGGTAACTCGTTTTTCAGTCGTAGGGCTTTTGTTCAAGTTGATAGGTTCATTGAAGGTGGGAGCTTTCCCACTACCAAGGAAGCTCAAGCCATTGCTGATGATGTTTTTTCACTCTTTGTGAGTGAGGAAGTTGATAAGGTTGAGCTTGTGTATACCAAGTTTGTGTCTTTGGTTAAGTTTGATCCTGTGATTCACACGTTGTTGCCTTTGTCAACCAAAGGAGAGGTTTGTGATGTGAATGGGAATAGTGTTGATGCTATGGAGGATGAGTTCTTCAGGTTGACTTCAAAGGATGGCAAGTTGGCTGTGGAGAGGGATGTTGTGAGGAGGAGGAAGAAAGATGAGTGTTTTCCCCTTATGCAATTTGAGCAAGACCCGGTTCAGATTCTTGATGCTATGATGCCTCTTTATTTGAATAGCCAGATTTTGAGGGGCTTGCAAGAATCACTGGCTAGTGAACTTGCTGCAAGGATGAGTGCCATGTCTAATGCAACTGATAATGCAAATGAGTTGAAGAAGAATCTTTCAGTTGCATACAATCGGCAACGGCAGGCAAAGATTACAGGGGAGATATTGGAGATTGTGGCAGGAGCCAATGCACAAACACAAATTGATTGA 1113 0.4636 MFSFTLTNGVPSKPHLSHSLSSSSQFHQTRFLHSPSKNHSSIRCGIRELRERINTVKNTQKITEAMKLVAAARVRRAQEAVVNGRPFSEKLVEVLHDINERLRNEDVDVPLTNVRPVKKVALVVITGDRGLCGGFNNAVVKKAETRIEELKKLGLDCVVISVGKKGNSFFSRRAFVQVDRFIEGGSFPTTKEAQAIADDVFSLFVSEEVDKVELVYTKFVSLVKFDPVIHTLLPLSTKGEVCDVNGNSVDAMEDEFFRLTSKDGKLAVERDVVRRRKKDECFPLMQFEQDPVQILDAMMPLYLNSQILRGLQESLASELAARMSAMSNATDNANELKKNLSVAYNRQRQAKITGEILEIVAGANAQTQID 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3921g00011 370 FunFam ATP synthase gamma chain, chloroplastic 44 111 - -
Gabi3921g00011 370 Coils Coil 326 346 - -
Gabi3921g00011 370 FunFam ATP synthase gamma chain, chloroplastic 113 236 - -
Gabi3921g00011 370 NCBIfam ATP synthase F1 subunit gamma 46 365 IPR000131 GO:0015986|GO:0045261|GO:0046933
Gabi3921g00011 370 Gene3D - 113 237 - -
Gabi3921g00011 370 PANTHER ATP SYNTHASE GAMMA CHAIN 12 365 IPR000131 GO:0015986|GO:0045261|GO:0046933
Gabi3921g00011 370 FunFam ATP synthase gamma chain, chloroplastic 262 366 - -
Gabi3921g00011 370 Hamap ATP synthase gamma chain [atpG]. 43 366 IPR000131 GO:0015986|GO:0045261|GO:0046933
Gabi3921g00011 370 MobiDBLite consensus disorder prediction 1 21 - -
Gabi3921g00011 370 Pfam ATP synthase 46 365 IPR000131 GO:0015986|GO:0045261|GO:0046933
Gabi3921g00011 370 ProSitePatterns ATP synthase gamma subunit signature. 352 365 IPR023632 -
Gabi3921g00011 370 CDD F1-ATPase_gamma 46 363 IPR000131 GO:0015986|GO:0045261|GO:0046933
Gabi3921g00011 370 Gene3D ATP synthase, gamma subunit, helix hairpin domain 266 366 - -
Gabi3921g00011 370 Gene3D ATP synthase, gamma subunit, helix hairpin domain 44 112 - -
Gabi3921g00011 370 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 45 365 IPR035968 GO:0015986|GO:0045261|GO:0046933
Gabi3921g00011 370 PRINTS ATP synthase gamma subunit signature 117 136 IPR000131 GO:0015986|GO:0045261|GO:0046933
Gabi3921g00011 370 PRINTS ATP synthase gamma subunit signature 210 227 IPR000131 GO:0015986|GO:0045261|GO:0046933
Gabi3921g00011 370 PRINTS ATP synthase gamma subunit signature 313 332 IPR000131 GO:0015986|GO:0045261|GO:0046933
Gabi3921g00011 370 PRINTS ATP synthase gamma subunit signature 344 365 IPR000131 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3921g00011 Gabi-Chr3921 237879 239573 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3921g00011 42 365 Primary Pumps ATPases AT1G15700 78.462 0.0 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3921g00011 K02115 - qsa:O6P43_013711 520.776