Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3921g00002 ATGATGGCTTCTCATATTCATTCTCTGGTTATGCTTGTTATGGTCATGTTGGCCACATCAATGATCCCTTCCAATGCAAAGCTCACTCGTCATTTCTATGATAAAGTTTGTCCTCAGGCACTGCCAGTCATAAGGTTTGTGGTTGAACAAGCAATCAATCGTGAAAGGCGCATGGGAGCATCCTTGCTGCGTTTGCATTTCCATGATTGCTTTGTCAATGGGTGTGATGGATCAGTGCTGCTAGATGACATTCCGAACTTCACTGGTGAGAAGACAGCCCTACCAAATTTGAATTCAGCAAGAGGTTTCGATGTGATTGATGAAATTAAAGCAGCAGTAGACAAAGCTTGCAAACGTCCTGTGGTATCATGTGCTGATATCTTAGCTATAGCTGCTCGTGATTCTATAGCCATATTGGGGGGTCCACACCTTTGGTACAATGTATTATTAGGCAGAAGAGATGCAAGAACTGCAAGCAAGGATGCTGCAAACACCAATCTTCCTGCACCATTTTTCAACTTCTCACAGCTTCTTTTTTCTTTCAATTCTCACGGATTGAACCTCAAAGACTTAGTGGCACTCTCTGGTGGCCACACCATTGGCTTTGCAAAGTGCTCTTCCTTCAAGGGCAGGATCTACAATGATTCCAACATAGACCATAGCTTTGCTTCCTCTTTAAGGAAAACATGTCCTCTAAGTGGTGGAGATAATAATTTGGCACCATCGGATTCAACTCCTGCAAAGGTTGACACTGTGTACTACAGGGATTTGCTTGGCAAAAAGGGTCTCTTGCATTCTGATCAAGAGCTCTTTAAGGGAATTGGCAGTGAAAGTGACAGATTGGTAGAGCTATATAGCATGAATCCATTTGCTTTTGCTAAAGACTTTAAAGCTTCTATGATCAAGATGGGTAAAATAAAGCCTCTTACTGGGAATGAGGGAGAGATTAGATGCAATTGCAGAAAAGTTAATACATTTTGA 981 0.42 MMASHIHSLVMLVMVMLATSMIPSNAKLTRHFYDKVCPQALPVIRFVVEQAINRERRMGASLLRLHFHDCFVNGCDGSVLLDDIPNFTGEKTALPNLNSARGFDVIDEIKAAVDKACKRPVVSCADILAIAARDSIAILGGPHLWYNVLLGRRDARTASKDAANTNLPAPFFNFSQLLFSFNSHGLNLKDLVALSGGHTIGFAKCSSFKGRIYNDSNIDHSFASSLRKTCPLSGGDNNLAPSDSTPAKVDTVYYRDLLGKKGLLHSDQELFKGIGSESDRLVELYSMNPFAFAKDFKASMIKMGKIKPLTGNEGEIRCNCRKVNTF 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3921g00002 326 Gene3D - 31 321 - -
Gabi3921g00002 326 Gene3D Peroxidase, domain 2 168 303 - -
Gabi3921g00002 326 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3921g00002 326 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3921g00002 326 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3921g00002 326 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3921g00002 326 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3921g00002 326 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3921g00002 326 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3921g00002 326 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3921g00002 326 CDD secretory_peroxidase 27 323 IPR033905 GO:0004601|GO:0042744
Gabi3921g00002 326 SUPERFAMILY Heme-dependent peroxidases 28 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi3921g00002 326 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3921g00002 326 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3921g00002 326 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3921g00002 326 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3921g00002 326 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3921g00002 326 FunFam Peroxidase 168 303 - -
Gabi3921g00002 326 ProSiteProfiles Plant heme peroxidase family profile. 27 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3921g00002 326 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Gabi3921g00002 326 FunFam Peroxidase 31 172 - -
Gabi3921g00002 326 Pfam Peroxidase 47 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3921g00002 326 PANTHER PEROXIDASE 72-RELATED 21 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3921g00002 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3921g00002 Gabi-Chr3921 55996 58001 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3921g00002 26 324 Peroxidase AT5G05340 57.616 1.15e-122 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3921g00002 K00430 - gmx:100816056 516.924