Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3920g00065 ATGTCTTTCCACAATCAAGCATTTTGGATGGGAAATAATTCTGGGTCTTTGAATGATGGTGACAAGACATATGACAATTCTTCTAGAATTGAATCCAAACGTGGCCATCAGTGGTTCATGGATGGCCCTGAAGTGGATATGTTTCCCAATAAGAAACAGGCAGTAGAGGCTCCAAACAATTTATTGTCAGGAATGCTCAACTCCAATATTTCTTCATGGGGAAATTCCTCAAGTCTTCACTCTTTTACTGGTCATTTTACTGAACAACTATTTGAGCCAGATGCAGCAACTATGAATTTTGAAGATGCAAACATTTCCTCTGTTAGCATGGATAGCACGTTAAGTGTGGAAAGAAAAGATAATTTGGATCCATTTGGGAATGACTCCTCATTTGGTTTATCCATGTCAACTACATTAGAAGATCCTCGATTAGTTTTTAATTATGATGGAATTAGAAAAGTCAAAGTTAATGAGGTGAAGGAATCTGAGAGTGTCAGATCTGTCCCTACAAATACAAATAATCCCTATGATAGGGGAGTTAGCAGCAATGTGTCATATCCTCATGCATACAACGGGGGTGATAATTCCATATCAATGAGTCAAACCTACAACAAAGGGGATGCGAATATAATATCTATGGATGATGCTTATGAGAGGACAGATAACAATTTAATGTCGATTGGTCAATCTTATAACAAGGGAGATGACAGCTTATCTATTCATCCAACATACAAAGAGATTTGTAATCCACTATCAATGGATCAAGGATTCAGCAAGGCCGATAGTGATGTGATGTCTATTACTCAAGCTTACAAGGAGGCCCATGACAATTCTATGTCAAGTAACCACTTATTCAGCAAGGTTGACACTGGCACCATATCAGTGGGTCACACCTACCACAAGGGGAGAAATGACCTGCCACTTGTTTCCCATTCTTATAACAAAGGAGAGAGCACTATCATATCCTTTGGTGGCTGTGATGATTATGATACAACTCCCTCTGGGATATTTATTTCCAGCTATGAACTGTTGATGGGTCAAGCACCTTCACATAAGTCAGAATCTGTGAATGAGAAAGATTTGGTTAGATCTACTTCTAATTTACTTCCAAGTACGGCTCAGACATCTGCACCTGAAAATGAAAATGTTCCCAAGACAAAAGATGAGATGAAAATGTCAAAGAAAGCTACTTCAAACAACTTCCCCTCCAATGTCAGAAGTTTGCTATCCACTGGAATGCTGGATGGTGTCTCTGTAAAATATAAGGCCTGGTCGCGGGAGAAGGAACTTCGAGGTGTCATAAAAGGTGCTGGGTATTTGTGCAGCTGTCAGTCATGTAATTTTTCCAAGGTCATTAATGCATATGAGTTTGAACGACATGCTGGTTGCAAGACTAAACATCCCAATAATCATATTTACTTTGAGAATGGGAAAACTATATATGGGGTAGTACAAGAGCTCAGGAGCACTCCGCAGACTATGTTATTTGAAGTTATTCAAACAATAACTGGTTCACCTATCAATCAGAAATCCTTCCGGATTTGGAAAGAATCCTTTTTGGCTGCTGCACGTGAACTCCAACGCATATGTGGAAAAGATGAAGCAAAACAATTGTTATAA 1620 0.3901 MSFHNQAFWMGNNSGSLNDGDKTYDNSSRIESKRGHQWFMDGPEVDMFPNKKQAVEAPNNLLSGMLNSNISSWGNSSSLHSFTGHFTEQLFEPDAATMNFEDANISSVSMDSTLSVERKDNLDPFGNDSSFGLSMSTTLEDPRLVFNYDGIRKVKVNEVKESESVRSVPTNTNNPYDRGVSSNVSYPHAYNGGDNSISMSQTYNKGDANIISMDDAYERTDNNLMSIGQSYNKGDDSLSIHPTYKEICNPLSMDQGFSKADSDVMSITQAYKEAHDNSMSSNHLFSKVDTGTISVGHTYHKGRNDLPLVSHSYNKGESTIISFGGCDDYDTTPSGIFISSYELLMGQAPSHKSESVNEKDLVRSTSNLLPSTAQTSAPENENVPKTKDEMKMSKKATSNNFPSNVRSLLSTGMLDGVSVKYKAWSREKELRGVIKGAGYLCSCQSCNFSKVINAYEFERHAGCKTKHPNNHIYFENGKTIYGVVQELRSTPQTMLFEVIQTITGSPINQKSFRIWKESFLAAARELQRICGKDEAKQLL 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3920g00065 539 PANTHER AUTOIMMUNE REGULATOR 9 479 - -
Gabi3920g00065 539 Pfam Tify domain binding domain 432 487 IPR032308 -
Gabi3920g00065 539 MobiDBLite consensus disorder prediction 368 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3920g00065 Gabi-Chr3920 676002 679583 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3920g00065 382 519 PHD Transcription Factor Family AT3G53680 55.797 5.00e-45 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3920g00065 - - mtr:25484103 770.385