Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3920g00064 ATGTCTTTCCACAATCAAGCATTTTGGATGGGAAATAATTCTGGGTCTTTGAATGATGGTGACAAGACATATGACAATTCTTCTAGAATTGAATCCAAACGTGGCCATCAGTGGTTCATGGATGGCCCTGAAGTGGATATGTTTCCCAATAAGAAACAGGCAGTAGAGGCTCCAAACAATTTATTGTCAGGAATGCTCAACTCCAATATTTCTTCATGGGGAAATTCCTCAAGTCTTCACTCTTTTACTGGTCATTTTACTGAACAACTATTTGAGCCAGATGCAGCAACTATGAATTTTGAAGATGCAAACATTTCCTCTGTTAGCATGGATAGCACGTTAAGTGTGGAAAGAAAAGATAATTTGGATCCATTTGGGAATGACTCCTCATTTGGTTTATCCATGTCAACTACATTAGAAGATCCTCGATTAGTTTTTAATTATGATGGAATTAGAAAAGTCAAAGTTAATGAGGTGAAGGAATCTGAGAGTGTCAGATCTGTCCCTACAAATACAAATAATCCCTATGATAGGGGAGTTAGCAGCAATGTGTCATATCCTCATGCATACAACGGGGGTGATAATTCCATATCAATGAGTCAAACCTACAACAAAGGGGATGCGAATATAATATCTATGGATGATGCTTATGAGAGGACAGATAACAATTTAATGTCGATTGGTCAATCTTATAACAAGGGAGATGACAGCTTATCTATTCATCCAACATACAAAGAGATTTGTAATCCACTATCAATGGATCAAGGATTCAGCAAGGCCGATAGTGATGTGATGTCTATTACTCAAGCTTACAAGGAGGCCCATGACAATTCTATGTCAAGTAACCACTTATTCAGCAAGGTTGACACTGGCACCATATCAGTGGGTCACACCTACCACAAGGGGAGAAATGACCTGCCACTTGTTTCCCATTCTTATAACAAAGGAGAGAGCACTATCATATCCTTTGGTGGCTGTGATGATTATGATACAACTCCCTCTGGGATATTTATTTCCAGCTATGAACTGTTGATGGGTCAAGCACCTTCACATAAGTCAGAATCTGTGAATGAGAAAGATTTGGTTAGATCTACTTCTAATTTACTTCCAAGTACGGCTCAGACATCTGCACCTGAAAATGAAAATGTTCCCAAGACAAAAGATGAGATGAAAATGTCAAAGAAAGCTACTTCAAACAACTTCCCCTCCAATGTCAGAAGTTTGCTATCCACTGGAATGCTGGATGGTGTCTCTGTAAAATATAAGGCCTGGTCGCGGGAGGAACTTCGAGGTGTCATAAAAGGTGCTGGGTATTTGTGCAGCTGTCAGTCATGTAATTTTTCCAAGGTCATTAATGCATATGAGTTTGAACGACATGCTGGTTGCAAGACTAAACATCCCAATAATCATATTTACTTTGAGAATGGGAAAACTATATATGGGGTAGTACAAGAGCTCAGGAGCACTCCGCAGACTATGTTATTTGAAGTTATTCAAACAATAACTGGTTCACCTATCAATCAGAAATCCTTCCGGATTTGGAAAGAATCCTTTTTGGCTGCTGCACGTGAACTCCAACGCATATGTGGAAAAGATGAAGCAAAACAATTGTTATAA 1617 0.3902 MSFHNQAFWMGNNSGSLNDGDKTYDNSSRIESKRGHQWFMDGPEVDMFPNKKQAVEAPNNLLSGMLNSNISSWGNSSSLHSFTGHFTEQLFEPDAATMNFEDANISSVSMDSTLSVERKDNLDPFGNDSSFGLSMSTTLEDPRLVFNYDGIRKVKVNEVKESESVRSVPTNTNNPYDRGVSSNVSYPHAYNGGDNSISMSQTYNKGDANIISMDDAYERTDNNLMSIGQSYNKGDDSLSIHPTYKEICNPLSMDQGFSKADSDVMSITQAYKEAHDNSMSSNHLFSKVDTGTISVGHTYHKGRNDLPLVSHSYNKGESTIISFGGCDDYDTTPSGIFISSYELLMGQAPSHKSESVNEKDLVRSTSNLLPSTAQTSAPENENVPKTKDEMKMSKKATSNNFPSNVRSLLSTGMLDGVSVKYKAWSREELRGVIKGAGYLCSCQSCNFSKVINAYEFERHAGCKTKHPNNHIYFENGKTIYGVVQELRSTPQTMLFEVIQTITGSPINQKSFRIWKESFLAAARELQRICGKDEAKQLL 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3920g00064 538 MobiDBLite consensus disorder prediction 368 398 - -
Gabi3920g00064 538 PANTHER AUTOIMMUNE REGULATOR 9 478 - -
Gabi3920g00064 538 Pfam Tify domain binding domain 431 486 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3920g00064 Gabi-Chr3920 676002 679583 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3920g00064 382 518 PHD Transcription Factor Family AT3G53680 55.797 3.17e-43 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3920g00064 - - mtr:25484103 763.837