Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3920g00062 ATGGAGAACCAACATATACAGAATTGGTTCCAAAGAACAAAGCCACTAATAGCAGTTGTGTCTTTGCAGTTTGGATATGCAATCATGGATATTTTATCCAAGGCTGCAATGAACAAGGGGATGAGTAATTATGTATTTGTTGTGTATCGCCATGCTGTTGCATTCATTGTCTTAGCTCCTTTTGCTTTGGTTCTTGAGAAGCTTGAGAAGATAAAAATAAGAAGTATACGCAGCCAAGCAAAGCTGGTGGGAACTCTAGCAACTGTTGGGGGCGCTATGGTCATGACACTTATGAAAGGCCCAATACTTTTTGGGACACAAGGAGGCAATAACAATAACGAGCAACATAATGGGACAGACACTCAACATACAATAGTGGGATCCGTAATGATCATAATTGGAAGCATTTGTTGGGCTTGGTTTGTGATACTCCAATCCATTACCCTTAATTCCTACCCTGCCCCACTCTCTCTTGCCTCATTGATATGCCTATTGGGCACAGTTGAAGGTGCCGCAGTTGCTATGATTATGGAAAGGGGCAATTCTTCAGTTTGGGCTCTAAAATGGGATACGAGTCTGCTCTGTTCTGTCTACACTGGTATAGTCTGCTCAGGATTGGCTTATTACTTGCAAGGAGTAGTGATGAAAACTAGAGGCCCAGTCTACGTGACAGCATTTAATCCCCTCTGCATGGTAATTGTGGCTGTCATGGGCTACTGCATTCTTGCTGAGCAAATATTCCTTGGAAGGGTGATCGGTGCTGTTGTCATTTGTTTGGGCCTGTATCTTGTGGTGTGGGGTAAAAGCAAAGATTACAACACACCAAATCCAATTATTCAAGAGCCCCCTATATTGCCGGTAGTTGAGGGCAATGCTAAGAAGGAACATTGTGCTAACGTGGACACCACTAAGAGTGATTTTGGAACTAGAGTCACAACACGAGATGAACAAGTATGA 957 0.4305 MENQHIQNWFQRTKPLIAVVSLQFGYAIMDILSKAAMNKGMSNYVFVVYRHAVAFIVLAPFALVLEKLEKIKIRSIRSQAKLVGTLATVGGAMVMTLMKGPILFGTQGGNNNNEQHNGTDTQHTIVGSVMIIIGSICWAWFVILQSITLNSYPAPLSLASLICLLGTVEGAAVAMIMERGNSSVWALKWDTSLLCSVYTGIVCSGLAYYLQGVVMKTRGPVYVTAFNPLCMVIVAVMGYCILAEQIFLGRVIGAVVICLGLYLVVWGKSKDYNTPNPIIQEPPILPVVEGNAKKEHCANVDTTKSDFGTRVTTRDEQV 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3920g00062 318 PANTHER WAT1-RELATED PROTEIN 14 63 IPR030184 GO:0016020|GO:0022857
Gabi3920g00062 318 Pfam EamA-like transporter family 127 265 IPR000620 GO:0016020
Gabi3920g00062 318 SUPERFAMILY Multidrug resistance efflux transporter EmrE 186 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3920g00062 Gabi-Chr3920 670369 673174 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3920g00062 1 73 Nodulin-like Gene Family AT2G37460 54.795 3.28e-18 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3920g00062 - - pcin:129305629 337.806