Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3920g00061 ATGGAGAACCAACATATACAGAATTGGTTCCAAAGAACAAAGCCACTAATAGCAGTTGTGTCTTTGCAGTTTGGATATGCAATCATGGATATTTTATCCAAGGCTGCAATGAACAAGGGGATGAGTAATTATGTATTTGTTGTGTATCGCCATGCTGTTGCATTCATTGTCTTAGCTCCTTTTGCTTTGGTTCTTGAGAAGCCAGTTATTGACCAGAATTTGTATTTTTTGGGGATGAAGTACACAACAGCAACCTTTGCAGTTGCCATGTTCAATGTTGTTCCTGCCATTACCTTCTTCTTCGCTTGGATTCTTAGGCTTGAGAAGATAAAAATAAGAAGTATACGCAGCCAAGCAAAGCTGGTGGGAACTCTAGCAACTGTTGGGGGCGCTATGGTCATGACACTTATGAAAGGCCCAATACTTTTTGGGACACAAGGAGGCAATAACAATAACGAGCAACATAATGGGACAGACACTCAACATACAATAGTGGGATCCGTAATGATCATAATTGGAAGCATTTGTTGGGCTTGGTTTGTGATACTCCAATCCATTACCCTTAATTCCTACCCTGCCCCACTCTCTCTTGCCTCATTGATATGCCTATTGGGCACAGTTGAAGGTGCCGCAGTTGCTATGATTATGGAAAGGGGCAATTCTTCAGTTTGGGCTCTAAAATGGGATACGAGTCTGCTCTGTTCTGTCTACACTGGTATAGTCTGCTCAGGATTGGCTTATTACTTGCAAGGAGTAGTGATGAAAACTAGAGGCCCAGTCTACGTGACAGCATTTAATCCCCTCTGCATGGTAATTGTGGCTGTCATGGGCTACTGCATTCTTGCTGAGCAAATATTCCTTGGAAGGGTGATCGGTGCTGTTGTCATTTGTTTGGGCCTGTATCTTGTGGTGTGGGGTAAAAGCAAAGATTACAACACACCAAATCCAATTATTCAAGAGCCCCCTATATTGCCGGTAGTTGAGGGCAATGCTAAGAAGGAACATTGTGCTAACGTGGACACCACTAAGAGTGATTTTGGAACTAGAGTCACAACACGAGATGAACAAGTATGA 1074 0.4283 MENQHIQNWFQRTKPLIAVVSLQFGYAIMDILSKAAMNKGMSNYVFVVYRHAVAFIVLAPFALVLEKPVIDQNLYFLGMKYTTATFAVAMFNVVPAITFFFAWILRLEKIKIRSIRSQAKLVGTLATVGGAMVMTLMKGPILFGTQGGNNNNEQHNGTDTQHTIVGSVMIIIGSICWAWFVILQSITLNSYPAPLSLASLICLLGTVEGAAVAMIMERGNSSVWALKWDTSLLCSVYTGIVCSGLAYYLQGVVMKTRGPVYVTAFNPLCMVIVAVMGYCILAEQIFLGRVIGAVVICLGLYLVVWGKSKDYNTPNPIIQEPPILPVVEGNAKKEHCANVDTTKSDFGTRVTTRDEQV 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3920g00061 357 PANTHER WAT1-RELATED PROTEIN 14 311 IPR030184 GO:0016020|GO:0022857
Gabi3920g00061 357 Pfam EamA-like transporter family 166 304 IPR000620 GO:0016020
Gabi3920g00061 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 136 - -
Gabi3920g00061 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 225 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3920g00061 Gabi-Chr3920 670369 673174 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3920g00061 1 340 Nodulin-like Gene Family AT2G37460 56.831 4.91e-140 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3920g00061 - - gmx:100811147 483.411