Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3920g00060 ATGGAGAACCAACATATACAGAATTGGTTCCAAAGAACAAAGCCACTAATAGCAGTTGTGTCTTTGCAGTTTGGATATGCAATCATGGATATTTTATCCAAGGCTGCAATGAACAAGGGGATGAGTAATTATGTATTTGTTGTGTATCGCCATGCTGTTGCATTCATTGTCTTAGCTCCTTTTGCTTTGGTTCTTGAGAAGAAAGTAAGGCCAAAGATGACACTTTCAATCTTCATGAAGATAGTGGCGCTAAGCTTGCTAGAGCCAGTTATTGACCAGAATTTGTATTTTTTGGGGATGAAGTACACAACAGCAACCTTTGCAGTTGCCATGTTCAATGTTGTTCCTGCCATTACCTTCTTCTTCGCTTGGATTCTTAGGCTTGAGAAGATAAAAATAAGAAGTATACGCAGCCAAGCAAAGCTGGTGGGAACTCTAGCAACTGTTGGGGGCGCTATGGTCATGACACTTATGAAAGGCCCAATACTTTTTGGGACACAAGGAGGCAATAACAATAACGAGCAACATAATGGGACAGACACTCAACATACAATAGTGGGATCCGTAATGATCATAATTGGAAGCATTTGTTGGGCTTGGTTTGTGATACTCCAATCCATTACCCTTAATTCCTACCCTGCCCCACTCTCTCTTGCCTCATTGATATGCCTATTGGGCACAGTTGAAGGTGCCGCAGTTGCTATGATTATGGAAAGGGGCAATTCTTCAGTTTGGGCTCTAAAATGGGATACGAGTCTGCTCTGTTCTGTCTACACTGGTATAGTCTGCTCAGGATTGGCTTATTACTTGCAAGGAGTAGTGATGAAAACTAGAGGCCCAGTCTACGTGACAGCATTTAATCCCCTCTGCATGGTAATTGTGGCTGTCATGGGCTACTGCATTCTTGCTGAGCAAATATTCCTTGGAAGGGTGATCGGTGCTGTTGTCATTTGTTTGGGCCTGTATCTTGTGGTGTGGGGTAAAAGCAAAGATTACAACACACCAAATCCAATTATTCAAGAGCCCCCTATATTGCCGGTAGTTGAGGGCAATGCTAAGAAGGAACATTGTGCTAACGTGGACACCACTAAGAGTGATTTTGGAACTAGAGTCACAACACGAGATGAACAAGTATGA 1137 0.4274 MENQHIQNWFQRTKPLIAVVSLQFGYAIMDILSKAAMNKGMSNYVFVVYRHAVAFIVLAPFALVLEKKVRPKMTLSIFMKIVALSLLEPVIDQNLYFLGMKYTTATFAVAMFNVVPAITFFFAWILRLEKIKIRSIRSQAKLVGTLATVGGAMVMTLMKGPILFGTQGGNNNNEQHNGTDTQHTIVGSVMIIIGSICWAWFVILQSITLNSYPAPLSLASLICLLGTVEGAAVAMIMERGNSSVWALKWDTSLLCSVYTGIVCSGLAYYLQGVVMKTRGPVYVTAFNPLCMVIVAVMGYCILAEQIFLGRVIGAVVICLGLYLVVWGKSKDYNTPNPIIQEPPILPVVEGNAKKEHCANVDTTKSDFGTRVTTRDEQV 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3920g00060 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 157 - -
Gabi3920g00060 378 Pfam EamA-like transporter family 16 136 IPR000620 GO:0016020
Gabi3920g00060 378 Pfam EamA-like transporter family 187 325 IPR000620 GO:0016020
Gabi3920g00060 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 330 - -
Gabi3920g00060 378 PANTHER WAT1-RELATED PROTEIN 14 332 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3920g00060 Gabi-Chr3920 670369 673174 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3920g00060 1 361 Nodulin-like Gene Family AT2G37460 61.202 3.61e-156 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3920g00060 - - gmx:100811147 530.02