Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi3920g00035 | ATGGCGGAGTCACGGCGGCTCCGACAGCTGCAATCGGAACAGGCGAACAAGATTTGCGTGGATTGCTCCCAGAAGAACCCGCAGTGGGCGTCGGTGTCCTACGGCGTGTTCATGTGCCTCGAGTGTTCCGGCAAGCACCGTGGCCTCGGCGTCCACATCTCCTTCGTTCGATCGGTGACAATGGATTCCTGGTCCGATATCCAGATCAAGAAGATGGAAGCCGGTGGCAACGACAAGCTCAATGCATTCTTCGCTCAGTACTCTATATCTAAGGAAACAGAAATCGTCACCAAGTACAACACCAACGCCGCCGCCGTCTACCGCGATCGGATCCAGGCCATCGCCGAGGGCCGTCCGTGGCGCGATCCGCCGATTGTGAAGGAGAATCTCGCGGCCTCCGGCATGGGGAAGCCGCCGCGGATGCAGAGTCGCCGGAATAATGACGGAGGTTGGGACGATTGGGATAACGAAGGCGGTTTGGGAAACTCCGGAGATCTCAGGAGCAAGTCGACCGGAGATTTCAGGAGCGTTAATGGTGGCGGTGCGCCGTTGAAGTCGAGGTCGACGGAGGATATGTACACGCGGTCGCAACTGGATGCTTCAGCGGCGAATAAGGAGAGCTTCTTTGCTCGGAAGATGGTGGAGAACGAGTCGCGACCCGAAGGGCTTCCGCCGTCGCAGGGTGGGAAGTACGTTGGGTTCGGATCGAGTCCCGCGCCTTCGCAGAGGAGCAATCCGCAGAAGGATTATGATTATTTCTCTGTCGTTTCTCAGGGGATTGGTAAATTGTCACTGGTTGCTGCATCTGCGGCTCAATCTGCAGCCACTGTTGTTCAAGCAGGCACAAAAGACATCACTTCTAAGGTCAAGGAGGGTGGATATGATCAGAAGGTCAATGAAACTGTCAATGTTGTCTCTCAAAAGACAGCAGAGATTGGAGAAAGGACATGGGGTATAATGAAAGGGGTCATGGCTTTGGCTTCACAGAAGGTTGAGGAGTACACTAGAGATAACCCAAATTGGAACACTGATAACTGGCAACAAAATGAGAATGATAGAAATGGTTACTATCAGGATTTCAATCAAGAGAACAAAGGCTGGAATTCTTCTACCGGGAGAGAAGAATCTTCAGGACAATTTAAAACTCATAGCTCAAGCTCTTGGGATGATTGGGACCACAAAGATAGTAGGAAGGAAGAACCAACTAAAGGATCGGCTTCCCATACTAATGATGGTTGGGCTGGCTGGGATAATGCGAAAGATGATGGATTTGATAATTTTTATGAAGGTGCATCTAACAAGAAAGCTGTTGGTCATAATGGCAGCTCAGATGCCACTTGGTCAGGGGGAGGATTTCTCTAA | 1362 | 0.5147 | MAESRRLRQLQSEQANKICVDCSQKNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVTMDSWSDIQIKKMEAGGNDKLNAFFAQYSISKETEIVTKYNTNAAAVYRDRIQAIAEGRPWRDPPIVKENLAASGMGKPPRMQSRRNNDGGWDDWDNEGGLGNSGDLRSKSTGDFRSVNGGGAPLKSRSTEDMYTRSQLDASAANKESFFARKMVENESRPEGLPPSQGGKYVGFGSSPAPSQRSNPQKDYDYFSVVSQGIGKLSLVAASAAQSAATVVQAGTKDITSKVKEGGYDQKVNETVNVVSQKTAEIGERTWGIMKGVMALASQKVEEYTRDNPNWNTDNWQQNENDRNGYYQDFNQENKGWNSSTGREESSGQFKTHSSSSWDDWDHKDSRKEEPTKGSASHTNDGWAGWDNAKDDGFDNFYEGASNKKAVGHNGSSDATWSGGGFL | 453 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi3920g00035 | 453 | MobiDBLite | consensus disorder prediction | 336 | 385 | - | - | |
Gabi3920g00035 | 453 | ProSiteProfiles | ARF GTPase-activating proteins domain profile. | 4 | 120 | IPR001164 | GO:0005096 | |
Gabi3920g00035 | 453 | SMART | arf_gap_3 | 4 | 120 | IPR001164 | GO:0005096 | |
Gabi3920g00035 | 453 | SUPERFAMILY | ArfGap/RecO-like zinc finger | 5 | 113 | IPR037278 | - | |
Gabi3920g00035 | 453 | FunFam | ADP-ribosylation factor GTPase-activating protein | 1 | 129 | - | - | |
Gabi3920g00035 | 453 | Gene3D | Arf GTPase activating protein | 1 | 126 | IPR038508 | - | |
Gabi3920g00035 | 453 | PRINTS | HIV Rev interacting protein signature | 16 | 35 | IPR001164 | GO:0005096 | |
Gabi3920g00035 | 453 | PRINTS | HIV Rev interacting protein signature | 56 | 77 | IPR001164 | GO:0005096 | |
Gabi3920g00035 | 453 | PRINTS | HIV Rev interacting protein signature | 35 | 52 | IPR001164 | GO:0005096 | |
Gabi3920g00035 | 453 | CDD | ArfGap_ArfGap1 | 5 | 117 | - | - | |
Gabi3920g00035 | 453 | MobiDBLite | consensus disorder prediction | 336 | 453 | - | - | |
Gabi3920g00035 | 453 | Pfam | Putative GTPase activating protein for Arf | 5 | 107 | IPR001164 | GO:0005096 | |
Gabi3920g00035 | 453 | MobiDBLite | consensus disorder prediction | 215 | 246 | - | - | |
Gabi3920g00035 | 453 | MobiDBLite | consensus disorder prediction | 130 | 200 | - | - | |
Gabi3920g00035 | 453 | PANTHER | ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED | 1 | 452 | IPR044519 | GO:0005096|GO:0016192 | |
Gabi3920g00035 | 453 | MobiDBLite | consensus disorder prediction | 386 | 405 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi3920g00035 | Gabi-Chr3920 | 496373 | 500531 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi3920g00035 | 5 | 87 | C2H2 Transcription Factor Family | AT4G21160 | 47.619 | 9.00e-22 | 94.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi3920g00035 | K12492 | - | gmx:100806519 | 713.375 |