Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3920g00021 ATGAGACTTTCCTTTTTCTCACTTCATCACCCTCTCCCTCTCCCTTCCCACTACCATTACCATTACCCTTACCCCATCAATTTTAACCATTCTTCTTCACATACCCTTTTAACTCTCTCCTCCTCCACCAGCACAACCCACACTGGGTCTCGCATGGACGGCGCCTCCTCCTCCTCCTTCCAGCGCCACCGCCGGAAAGACAAGGTGGTCGTCATCGTTGGCGCCACAGGCTCCGGAAAATCACGCCTTTCCGTCGAACTCGCCACCTTATTCCCTTTCTCAGAAATCATCAACTCCGATAAAATGCAAGTCTACAGAGGCCTCGACATCACCACCAACAAGATTCCACTCCACCAACGCAACGGCGTCCCCCACCACCTTATCGGCAATGTCGACCCTTCTCACGGCGAGTTTTCCCCCTCGGACTTTCGCTGCCACGCCGGCGAAGTCATCTCCGACATCACCTCCAGGAGGAAGCTCCCCATCGTGGTTGGCGGATCCAACTCGTTCATTCACGCTCTTCTGGTGGAACGATTCGACCCCGAGTTGAACGTGTTTAACGATGAGTCGTCGCTTTCTATATCCTCCGAGTTGAGGTACAAGTGTTGCTTCCTCTGGTTGGACATATCATTTCCTGTGTTATCGGATTACTTGTTGAAGCGAGTCGACGACATGCTTGACTCGGGGATGGTGGACGAGTTGGCTGAGTTCTTCGACCCGAACGCGACGAACAACCAAACCGGGTTGAGGAAAGCCATCGGGGTGCCTGAGTTCGACCGGTTTTTTAAAAAGTACCCACCGGGACCCAGGGAAGAAGAGGGCGATGAGGATCGGGTGCGGAAGGGTGCATACGAGGAAGCAGTGAGGGCGATAAAGGAGAACACGTGTCAGCTGGCGAAGAGGCAGATAGGGAAGATCCTGCTGCTAAAACGGGCAGGGTGGGACCTACGTAGGATTGACGCCACGGAGGCGTTTCGGGCGGCGCTGAAGTCAGGGTGTAACGGCAGCGGAGACGGTTTCCCGGATATATGGAAGAGGCAGGTTTTGGAACCAAGCGCGAAGATTGTGAAGCGGTTCTTGATGGAGTAG 1089 0.5436 MRLSFFSLHHPLPLPSHYHYHYPYPINFNHSSSHTLLTLSSSTSTTHTGSRMDGASSSSFQRHRRKDKVVVIVGATGSGKSRLSVELATLFPFSEIINSDKMQVYRGLDITTNKIPLHQRNGVPHHLIGNVDPSHGEFSPSDFRCHAGEVISDITSRRKLPIVVGGSNSFIHALLVERFDPELNVFNDESSLSISSELRYKCCFLWLDISFPVLSDYLLKRVDDMLDSGMVDELAEFFDPNATNNQTGLRKAIGVPEFDRFFKKYPPGPREEEGDEDRVRKGAYEEAVRAIKENTCQLAKRQIGKILLLKRAGWDLRRIDATEAFRAALKSGCNGSGDGFPDIWKRQVLEPSAKIVKRFLME 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3920g00021 362 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 66 360 IPR039657 -
Gabi3920g00021 362 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 240 IPR027417 -
Gabi3920g00021 362 MobiDBLite consensus disorder prediction 39 57 - -
Gabi3920g00021 362 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 211 316 - -
Gabi3920g00021 362 MobiDBLite consensus disorder prediction 39 61 - -
Gabi3920g00021 362 FunFam Adenylate isopentenyltransferase 211 316 - -
Gabi3920g00021 362 Gene3D - 66 360 IPR027417 -
Gabi3920g00021 362 Pfam IPP transferase 103 177 - -
Gabi3920g00021 362 Pfam IPP transferase 196 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3920g00021 Gabi-Chr3920 323753 324841 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3920g00021 199 360 C2H2 Transcription Factor Family AT2G27760 29.508 1.60e-14 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3920g00021 K10760 - qsa:O6P43_025717 453.751