Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3920g00009 ATGAAACTGAGCTGCAATGGGTGCCGCATACTTCGCAAAGGTTGCAGTGACAACTGCATCATCAGGCCCTGCCTTGAGTGGATCAACTCCCCTGAGTCCCAAGCCAACGCCACCCTCTTCCTTGCCAAATTCTATGGTCGCACTGGCTTGCTCAACCTCATCACCGCCGCTCCACAAAACCTTGGCCCAGGTGCTGTGTTCAGGTCACTGTTGTACGAGGCTTGTGGGAGATTAGTGAATCCAACTTATGGCTCATTAGGTTTGTTCTGGACCGGGGAGTGGGCCCGATGTGAAGCTGCTGTGGACGCCGTGCTGACTGGGTCCAACATTGATGGCGTGGCACTTCCTGATTGGCCTACCTCAGCGACATTTGGTGGTGGTCATGCTCTACCAGCCTGTGATATACGCCACGTGCCTAGAGGAACCATCCTCGATGATGTCAGAGAAAGGACTCGGTTCAATAGAACTGGGCAAGTCACCAGACCCAAACCGCAAGTGGGTTCGGTAGACTCGGCTTCATTGTGGAAATCCGGTTGGGAGAGTGAAAGCGTGATGATGGCTTCGTTGGTGAGCCAGGACCAGCCGAACCGAACCGGTGAAAATGGGGTGAACCTGGAACTCACTCTTGGCTTCCGTTGCCAATCAACCAGGGGCGAGCAAAGGAATTATTAA 672 0.5387 MKLSCNGCRILRKGCSDNCIIRPCLEWINSPESQANATLFLAKFYGRTGLLNLITAAPQNLGPGAVFRSLLYEACGRLVNPTYGSLGLFWTGEWARCEAAVDAVLTGSNIDGVALPDWPTSATFGGGHALPACDIRHVPRGTILDDVRERTRFNRTGQVTRPKPQVGSVDSASLWKSGWESESVMMASLVSQDQPNRTGENGVNLELTLGFRCQSTRGEQRNY 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3920g00009 223 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 191 - -
Gabi3920g00009 223 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Gabi3920g00009 223 ProSiteProfiles LOB domain profile. 3 110 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3920g00009 Gabi-Chr3920 154417 155376 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3920g00009 1 209 AS2 family AT3G02550 45.455 4.71e-59 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gabi3920g00009 LOB 5.3e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3920g00009 - - gmx:100779034 324.324