Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3912g00002 ATGACCATGACCATGATGATGTCTCTGTTTGTGATCTTACTCCTCCTACGCACAACCTCAGTGGCATCCTCGGATCTCCGACCTGGGTTTTACTCAAATACATGTCCAGAAGCTGAACTCATAGTTCGAGATGTCATGAAGAAAGCCCTCGCCAGGGAACCAAGAAGTGTTGCCTCTGTTATGCGCTTCCAATTCCATGATTGCTTCGTCAACGGGTGTGATGCTTCTATGTTACTTGATGACACACCAACGATGCTTGGTGAGAAATTAGCACTCTCCAATATAAATTCCCTTAGATCATATGAACTTATTGATGAAGTTAAGGAAGCACTAGAGAAAACGTGCCCAGGAGTTGTTTCTTGTGCAGATATCATAATCATGGCTTCTAGAGATGCTGTAGCACTGACAGGAGGACCCAACTGGGAGGTGAGGTTGGGAAGATTGGACAGCTTGAGTGCTTGTCAAGAAGACTCAAACAATATCATGCCCAGTCCAAGAGCCAATGCAAGCTCTCTTATTGACCTATTCCAGAAATTCAACCTTAGTGTGAAAGACCTTGTAGCACTCTCAGGATCTCACTCTATTGGCAAAGGTCGTTGTTTTTCAATCATGTTTAGGCTATACAATCAATCTGGTAGTGGAAAGCCTGACCCTGCCATTGAGCCTAAGTTTAGAGAAGAGCTTTACAAGCTATGTCCACCAAATGTTGACCAAAATGTGACAGGGAACCTTGATTCCACTCCTCGGGTGTTTGATAACCAATATTTCAAGGACTTGGTTGTTGGGAGAGGATTTCTTAACTCTGATCAAACACTTTTCACTTTCCCTCAAACAAGGGAGTTTGTGAGGTTATATAGTAGACATCAAAGTGAGTTTTTTGAAGCATTTGTGGAAGGGATGTTGAAAATGGGTGACTTGCAGTCTGGTAGGCCTGGGGAGATTAGGAGGAATTGCAGGATGGTCAATGCTTTGCTCTTTGAATCCCACCACAAGACAGAGAATAATGATAAATCAATATAA 1020 0.4294 MTMTMMMSLFVILLLLRTTSVASSDLRPGFYSNTCPEAELIVRDVMKKALAREPRSVASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLALSNINSLRSYELIDEVKEALEKTCPGVVSCADIIIMASRDAVALTGGPNWEVRLGRLDSLSACQEDSNNIMPSPRANASSLIDLFQKFNLSVKDLVALSGSHSIGKGRCFSIMFRLYNQSGSGKPDPAIEPKFREELYKLCPPNVDQNVTGNLDSTPRVFDNQYFKDLVVGRGFLNSDQTLFTFPQTREFVRLYSRHQSEFFEAFVEGMLKMGDLQSGRPGEIRRNCRMVNALLFESHHKTENNDKSI 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3912g00002 339 CDD secretory_peroxidase 26 321 IPR033905 GO:0004601|GO:0042744
Gabi3912g00002 339 Gene3D - 30 322 - -
Gabi3912g00002 339 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3912g00002 339 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3912g00002 339 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3912g00002 339 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3912g00002 339 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3912g00002 339 Gene3D Peroxidase, domain 2 163 303 - -
Gabi3912g00002 339 FunFam Peroxidase 163 303 - -
Gabi3912g00002 339 ProSiteProfiles Plant heme peroxidase family profile. 25 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3912g00002 339 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Gabi3912g00002 339 Pfam Peroxidase 42 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3912g00002 339 FunFam Peroxidase 29 172 - -
Gabi3912g00002 339 SUPERFAMILY Heme-dependent peroxidases 25 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi3912g00002 339 PANTHER PEROXIDASE 72-RELATED 23 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3912g00002 339 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3912g00002 339 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3912g00002 339 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3912g00002 339 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3912g00002 339 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3912g00002 339 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3912g00002 339 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3912g00002 339 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3912g00002 339 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3912g00002 Gabi-Chr3912 16352 19318 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3912g00002 3 322 Peroxidase AT2G22420 73.750 1.88e-180 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3912g00002 K00430 - gmx:100796737 566.614